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Makefile

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    Makefile 348 B
    .PHONY:test clean
    
    test:testsuite/test_rep.sh
    	@testsuite/test_rep.sh testset1
    	@echo "all tests passed"
    
    test_y:
    	src/phybema.py --tools mash andi -- testdata/Yersinia/
    
    test_e:
    	src/phybema.py --tools mash andi -- testdata/E_coli/ 
    
    clean:
    	@${RM} -r temp out
    	@${RM} -f testdata/E_coli/sequence.fasta
    	@${RM} -f testdata/Yersinia/sequence.fasta