diff --git a/Makefile b/Makefile index 9b673b241dec18a0495da4bc5d8fb4db4194c686..b8a66202e6e3191f8785577d13b068b994a780c0 100644 --- a/Makefile +++ b/Makefile @@ -5,10 +5,10 @@ test:testsuite/test_rep.sh @echo "all tests passed" test_y: - src/phybema.py --tools mash andi -- testdata/Yersinia/ + src/phybema.py -o none --tools mash andi -- testdata/Yersinia/ test_e: - src/phybema.py --tools mash andi -- testdata/E_coli/ + src/phybema.py -o none --tools mash andi -- testdata/E_coli/ clean: @${RM} -r temp out diff --git a/testsuite/test_rep.sh b/testsuite/test_rep.sh index 3b7ffcbc37eb0b25e2f47391949df7027c5d91a6..9aee462e1dd9352c6326ec7e7c2e2b8af7bbab42 100755 --- a/testsuite/test_rep.sh +++ b/testsuite/test_rep.sh @@ -7,7 +7,7 @@ then fi subdir=$1 -src/phybema.py --tools mash andi dnadiff -- testdata/${subdir}/ +src/phybema.py -o none --tools mash andi dnadiff -- testdata/${subdir}/ for prog in andi mash do for suffix in mat nh