diff --git a/.DS_Store b/.DS_Store
deleted file mode 100644
index 5008ddfcf53c02e82d7eee2e57c38e5672ef89f6..0000000000000000000000000000000000000000
Binary files a/.DS_Store and /dev/null differ
diff --git a/count_journal.py b/count_journal.py
deleted file mode 100755
index 13886a2e7badf339bdd23475f7d3de713329f472..0000000000000000000000000000000000000000
--- a/count_journal.py
+++ /dev/null
@@ -1,40 +0,0 @@
-#!/usr/bin/env python3
-
-from input.interface import InputInterface as Input
-
-def count_journals(url: str):
- inter = Input()
- pub = inter.get_publication(url)
-
- if pub.citations:
- for citation in pub.citations:
- journal = citation.journal
- if journal in cit:
- cit[journal] += 1
- else:
- cit[journal] = 1
-
- if pub.references:
- for reference in pub.references:
- journal = reference.journal
- if journal in cit:
- cit[journal] += 1
- else:
- cit[journal] = 1
-
-if __name__ == "__main__":
- cit = {}
-
- count_journals("https://doi.org/10.1021/acs.jcim.1c00203")
- count_journals("https://doi.org/10.1021/acs.jcim.6b00561")
- count_journals("https://doi.org/10.1021/acs.jcim.6b00613")
- count_journals("https://doi.org/10.1021/acs.jcim.1c00917")
- count_journals("https://doi.org/10.1021/acs.jmedchem.0c01332")
- #count_journals("https://pubs.acs.org/doi/10.1021/acs.biochem.1c00290")
- #count_journals("https://pubs.acs.org/doi/10.1021/acsenvironau.1c00007")
- #count_journals("https://pubs.acs.org/doi/10.1021/acs.biochem.7b01162")
-
- cit = dict(sorted(cit.items(), key=lambda item: item[1]))
- for journal in cit:
- if journal != "":
- print(f'{journal}: {cit[journal]}')
diff --git a/example_input.py b/example_input.py
deleted file mode 100755
index c9bca4189fce4c1fd0a0dfc42ef4e517baa5f406..0000000000000000000000000000000000000000
--- a/example_input.py
+++ /dev/null
@@ -1,13 +0,0 @@
-#!/usr/bin/env python3
-
-from input.interface import InputInterface as Input
-
-def main(url: str):
- i = Input()
- #print(i.get_publication(url))
- print(i.get_pub_light(url))
- # print(i.get_supported_fetchers()) Useless because all classes are called the same
-
-if __name__ == "__main__":
- #main("https://doi.org/10.1021/acs.jcim.1c0023")
- main("https://doi.org/10.1021/acs.jcim.5b00332")
diff --git a/start_script.py b/start_script.py
deleted file mode 100644
index 9e674cfb87b30c403c641119bc4cc344e2bc6acc..0000000000000000000000000000000000000000
--- a/start_script.py
+++ /dev/null
@@ -1,19 +0,0 @@
-import sys
-import gc
-from pathlib import Path
-from verarbeitung.process_main import Processing
-#from verarbeitung.dev_files.print_graph_test import try_known_publications, try_delete_nodes
-
-
-doi_list = []
-#doi_list.append('https://pubs.acs.org/doi/10.1021/acs.jcim.9b00249')
-#doi_list.append('https://doi.org/10.1021/acs.jcim.9b00249')
-#doi_list.append('https://pubs.acs.org/doi/10.1021/acs.jcim.1c00203')
-doi_list.append('https://doi.org/10.1021/acs.jmedchem.0c01332')
-doi_list.append('https://pubs.acs.org/doi/10.1021/acs.jcim.6b00709')
-error_list = Processing(doi_list, 2, 2, 'test.json')
-print(error_list)
-
-del doi_list
-del error_list
-gc.collect()
diff --git a/test.json b/test.json
deleted file mode 100644
index 4ae068da7d62b6aca3b24f94807ac9404404f08f..0000000000000000000000000000000000000000
--- a/test.json
+++ /dev/null
@@ -1 +0,0 @@
-{"nodes": [{"doi": "https://doi.org/10.1021/acs.jmedchem.0c01332", "name": "Evolution of Novartis\u2019 Small Molecule Screening Deck Design", "author": ["Ansgar Schuffenhauer", "Nadine Schneider", "Samuel Hintermann", "Douglas Auld", "Jutta Blank", "Simona Cotesta", "Caroline Engeloch", "Nikolas Fechner", "Christoph Gaul", "Jerome Giovannoni", "Johanna Jansen", "John Joslin", "Philipp Krastel", "Eugen Lounkine", "John Manchester", "Lauren G. Monovich", "Anna Paola Pelliccioli", "Manuel Schwarze", "Michael D. Shultz", "Nikolaus Stiefl", "Daniel K. Baeschlin"], "year": "November 3, 2020", "journal": "Journal of Medicinal Chemistry", "group": "Input", "depth": 0, "citations": 8}, {"doi": "https://doi.org/10.1021/acsmedchemlett.1c00251", "name": "The Growing Importance of Chirality in 3D Chemical Space Exploration and Modern Drug Discovery Approaches for Hit-ID", "author": ["Ilaria Proietti Silvestri", "Paul J. J. Colbon"], "year": "July 16, 2021", "journal": "ACS Med. Chem. Lett.", "group": "Citedby", "depth": 1, "citations": 0}, {"doi": "https://doi.org/10.1021/acs.jmedchem.1c00416", "name": "Target-Based Evaluation of \u201cDrug-Like\u201d Properties and Ligand Efficiencies", "author": ["Paul D. Leeson", "A. Patricia Bento", "Anna Gaulton", "Anne Hersey", "Emma J. Manners", "Chris J. Radoux", "Andrew R. Leach"], "year": "May 13, 2021", "journal": "Journal of Medicinal Chemistry", "group": "Citedby", "depth": 1, "citations": 0}, {"doi": "https://doi.org/10.1021/acs.jcim.6b00709", "name": "Matched Molecular Series: Measuring SAR Similarity", "author": ["Emanuel S. R. Ehmki", "Christian Kramer"], "year": "May 1, 2017", "journal": "Journal of Chemical Information and Modeling", "group": "Input", "depth": 0, "citations": 5}, {"doi": "https://doi.org/10.1021/acs.jcim.0c00269", "name": "Matched Molecular Series Analysis for ADME Property Prediction", "author": ["Mahendra Awale", "Sereina Riniker", "Christian Kramer"], "year": "May 5, 2020", "journal": "Journal of Chemical Information and Modeling", "group": "Citedby", "depth": 1, "citations": 6}, {"doi": "https://doi.org/10.1021/acs.jcim.0c00290", "name": "Identification of Bioisosteric Substituents by a Deep Neural Network", "author": ["Peter Ertl"], "year": "June 15, 2020", "journal": "Journal of Chemical Information and Modeling", "group": "Citedby", "depth": 2, "citations": 2}], "links": [{"source": "https://doi.org/10.1021/acsmedchemlett.1c00251", "target": "https://doi.org/10.1021/acs.jmedchem.0c01332"}, {"source": "https://doi.org/10.1021/acs.jmedchem.1c00416", "target": "https://doi.org/10.1021/acs.jmedchem.0c01332"}, {"source": "https://doi.org/10.1021/acs.jcim.0c00269", "target": "https://doi.org/10.1021/acs.jcim.6b00709"}, {"source": "https://doi.org/10.1021/acs.jcim.0c00290", "target": "https://doi.org/10.1021/acs.jcim.0c00269"}]}
\ No newline at end of file