# -*- coding: utf-8 -*- """ Functions to test and print the nodes and edges sets """ __authors__ = "Donna Löding, Alina Molkentin, Xinyi Tang, Judith Große, Malte Schokolowski" __email__ = "cis-project2021@zbh.uni-hamburg.de" __status__ = "Production" #__copyright__ = "" #__credits__ = ["", "", "", ""] #__license__ = "" #__version__ = "" #__maintainer__ = "" import sys #sys.path.insert(1, 'C:\Users\Malte\Git\CiS-Projekt\ci-s-projekt-verarbeitung\input') sys.path.append("../") from input.interface import InputInterface as Input from Processing import process_main from import_from_json import input_from_json from update_graph import check_graph_updates # a function to print nodes and edges from a graph def print_graph(nodes, edges): print("Knoten:\n") for node in nodes: print(node.title, "\n") print("\nKanten:\n") for edge in edges: print(edge,"\n") print(len(nodes)) print(len(edges)) print(" ") def print_extended_graph(nodes, edges): print("Knoten:\n") for node in nodes: print(node.title, "\n") print(node.doi_url) for reference in node.references: print(reference.doi_url) for citation in node.citations: print(citation.doi_url) print("\nKanten:\n") for edge in edges: print(edge,"\n") print(len(nodes)) print(len(edges)) print(" ") def print_simple(nodes, edges): # for node in nodes: # print(node) # for edge in edges: # print(edge) print(len(nodes)) print(len(edges)) print(" ") # program test with some random dois def try_known_publications(): doi_list = [] doi_list.append('https://pubs.acs.org/doi/10.1021/acs.jcim.9b00249') #doi_list.append('https://doi.org/10.1021/acs.jcim.9b00249') doi_list.append('https://pubs.acs.org/doi/10.1021/acs.jcim.1c00203') #arr.append('https://pubs.acs.org/doi/10.1021/acs.jcim.9b00249') doi_list.append('https://doi.org/10.1021/acs.jmedchem.0c01332') #arr.append('https://doi.org/10.1021/acs.jcim.0c00741') #arr.append('https://doi.org/10.1021/ci700007b') #doi_list.append('https://doi.org/10.1021/acs.jcim.5b00292') #doi_list.append('https://pubs.acs.org/doi/10.1021/acs.jcim.0c00675') #url = sys.argv[1] #arr.append[url] nodes, edges = process_main(doi_list,2,2) print_graph(nodes, edges) return(nodes, edges) def try_delete_nodes(): doi_list = [] doi_list.append('https://pubs.acs.org/doi/10.1021/acs.jcim.9b00249') #doi_list.append('https://pubs.acs.org/doi/10.1021/acs.jcim.1c00203') nodes, edges = process_main(doi_list,1,1) #print_simple(nodes, edges) # list_of_nodes_py, list_of_edges_py = input_from_json('json_text.json') # doi_list = [] # doi_list.append('https://pubs.acs.org/doi/10.1021/acs.jcim.9b00249') # valid_nodes, valid_edges = check_graph_updates(doi_list, list_of_nodes_py, list_of_edges_py) # print_simple(valid_nodes, valid_edges) def try_import(): nodes, edges = input_from_json('json_text.json') print_extended_graph(nodes,edges) #nodes, edges = try_known_publications() #nodes_new, edges_new = input_from_json("json_text.json") #print_graph(nodes_new, edges_new) try_delete_nodes() #try_import()