From 509dabe815888ae4c6403e75533c7614305f84c2 Mon Sep 17 00:00:00 2001
From: bay9355 <mia.le@studium.uni-hamburg.de>
Date: Sat, 11 Mar 2023 16:42:43 +0100
Subject: [PATCH] edited a local path
---
cami_src/cami.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/cami_src/cami.py b/cami_src/cami.py
index 85bbedd..8d0c2c0 100755
--- a/cami_src/cami.py
+++ b/cami_src/cami.py
@@ -182,7 +182,7 @@ def main(ppi_network, seeds, tools, tool_weights, consensus, evaluate,
original_seeds = [cami.ppi_vertex2gene[seed] for seed in base_seeds]
print(f'Initializing CAMI and the seed variation by running CAMI with all given seeds:{original_seeds}')
- with open('/Users/Mia/cami_local/cami/data/output/explorativeness.tsv', 'a') as f:
+ with open(os.path.join(home_path, f'data/output/explorativeness.tsv'), 'a') as f:
predict_and_make_consensus(vis=True)
seedname = seeds
for tool in cami.result_gene_sets:
--
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