From fc5d2427aeab58eff8ba156fa93536fdb4f86c5d Mon Sep 17 00:00:00 2001 From: bay9355 <mia.le@studium.uni-hamburg.de> Date: Tue, 28 Feb 2023 19:02:09 +0100 Subject: [PATCH] =?UTF-8?q?seed=5Fvariation=20bedingung=20eingef=C3=BCgt?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- cami_src/cami.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/cami_src/cami.py b/cami_src/cami.py index a11aee3..505bbb9 100755 --- a/cami_src/cami.py +++ b/cami_src/cami.py @@ -170,7 +170,7 @@ def main(ppi_network, seeds, tools, tool_weights, consensus, evaluate, cami.download_diagram(url) with open('/Users/Mia/cami_local/cami/data/output/explorativeness.tsv', 'a') as f: make_consensus(vis=True) - seedname = seeds.rsplit('/',1)[0] + seedname = seeds for tool in cami.result_gene_sets: f.write(f'\n{seedname}\t{len(cami.seed_lst)}\t{tool}\t{len(cami.result_gene_sets[tool])}') -- GitLab