From 222e2c0886e77dfa6ff589c419f6eefb64a13bb1 Mon Sep 17 00:00:00 2001
From: "Hartung, Michael" <michael.hartung@uni-hamburg.de>
Date: Fri, 12 May 2023 15:36:47 +0200
Subject: [PATCH] linting
Former-commit-id: fae4e0e74ca47b936d239523c2bcaf91c8653c5e [formerly d6aaec3ce324eac873f78d2bb9c82c9ff43509d6]
Former-commit-id: bd46e2bd31eceec3ffe1c83e5b1c467e2f5f8103
---
drugstone/models.py | 19 ++++++++++++++-----
drugstone/serializers.py | 21 ++++++++++++++++-----
2 files changed, 30 insertions(+), 10 deletions(-)
diff --git a/drugstone/models.py b/drugstone/models.py
index 5decf3d..f797111 100755
--- a/drugstone/models.py
+++ b/drugstone/models.py
@@ -317,10 +317,14 @@ class ProteinProteinInteraction(models.Model):
class ProteinDrugInteraction(models.Model):
id = models.BigAutoField(primary_key=True)
pdi_dataset = models.ForeignKey(
- PDIDataset, null=True, on_delete=models.CASCADE, related_name='pdi_dataset_relation')
- protein = models.ForeignKey('Protein', on_delete=models.CASCADE)
- drug = models.ForeignKey('Drug', on_delete=models.CASCADE)
- actions = models.CharField(max_length=255, default='[]')
+ PDIDataset,
+ null=True,
+ on_delete=models.CASCADE,
+ related_name="pdi_dataset_relation",
+ )
+ protein = models.ForeignKey("Protein", on_delete=models.CASCADE)
+ drug = models.ForeignKey("Drug", on_delete=models.CASCADE)
+ actions = models.CharField(max_length=255, default="[]")
class Meta:
unique_together = ("pdi_dataset", "protein", "drug")
@@ -329,7 +333,12 @@ class ProteinDrugInteraction(models.Model):
return f"{self.pdi_dataset}-{self.protein}-{self.drug}"
def __eq__(self, other):
- return self.pdi_dataset_id == other.pdi_dataset_id and self.protein_id == other.protein_id and self.drug_id == other.drug_id and self.actions == other.actions
+ return (
+ self.pdi_dataset_id == other.pdi_dataset_id
+ and self.protein_id == other.protein_id
+ and self.drug_id == other.drug_id
+ and self.actions == other.actions
+ )
def __ne__(self, other):
return not self.__eq__(other)
diff --git a/drugstone/serializers.py b/drugstone/serializers.py
index c4b820c..79080f8 100755
--- a/drugstone/serializers.py
+++ b/drugstone/serializers.py
@@ -2,20 +2,31 @@
import json
from rest_framework import serializers
from drugstone import models
-from drugstone.models import Protein, Task, Drug, ProteinDrugInteraction, \
- Tissue, ProteinProteinInteraction, Network, ProteinDisorderAssociation, Disorder, DrugDisorderIndication
+from drugstone.models import (
+ Protein,
+ Task,
+ Drug,
+ ProteinDrugInteraction,
+ Tissue,
+ ProteinProteinInteraction,
+ Network,
+ ProteinDisorderAssociation,
+ Disorder,
+ DrugDisorderIndication,
+)
class PDIDatasetSerializer(serializers.ModelSerializer):
class Meta:
model = models.PDIDataset
- fields = '__all__'
+ fields = "__all__"
class PPIDatasetSerializer(serializers.ModelSerializer):
class Meta:
model = models.PPIDataset
- fields = '__all__'
+ fields = "__all__"
+
class PDisDatasetSerializer(serializers.ModelSerializer):
class Meta:
@@ -176,7 +187,7 @@ class ProteinDrugInteractionSerializer(serializers.ModelSerializer):
class Meta:
model = ProteinDrugInteraction
- fields = ['dataset', 'protein', 'drug', 'actions']
+ fields = ["dataset", "protein", "drug", "actions"]
class ProteinDisorderAssociationSerializer(serializers.ModelSerializer):
--
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