From 8c3c38ea953d30f765562cdd88ba788b72dad71f Mon Sep 17 00:00:00 2001
From: AndiMajore <andi.majore@googlemail.com>
Date: Thu, 20 Apr 2023 11:18:45 +0200
Subject: [PATCH] small hotfix for unmappable compact notation nodes
Former-commit-id: d708bf98b43b750fef81e64457d4dd3edd048899 [formerly 4ff82f6a4f8b181bcb66b96b9f0081946ad57998]
Former-commit-id: f377cbec079ed3d7058912b416482f1bd662a9b6
---
drugstone/views.py | 9 ++++++++-
1 file changed, 8 insertions(+), 1 deletion(-)
diff --git a/drugstone/views.py b/drugstone/views.py
index e4cf1bb..89081ab 100755
--- a/drugstone/views.py
+++ b/drugstone/views.py
@@ -189,7 +189,14 @@ def map_nodes(request) -> Response:
nodes_mapped, id_key = query_proteins_by_identifier(node_ids, identifier)
# change data structure to dict in order to be quicker when merging
- nodes_mapped_dict = {id.upper(): node for node in nodes_mapped for id in node[id_key]}
+ nodes_mapped_dict = {}
+ for node in nodes_mapped:
+ if id_key in node:
+ for id in node[id_key]:
+ nodes_mapped_dict[id.upper()] = node
+ # TODO find solution if target id space is empty
+ # else:
+ # nodes_mapped_dict[node['id'].upper()] = node
# merge fetched data with given data to avoid data loss
for node in nodes:
--
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