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launch-analysis.component.html 8.94 KiB
<div class="modal" [class.is-active]="show">
<div class="modal-background"></div>
<div class="modal-card">
<header class="modal-card-head">
<p class="modal-card-title" *ngIf="target === 'drug'">
<span class="icon"><i class="fa fa-capsules"></i></span>
Find Drugs
</p>
<p class="modal-card-title" *ngIf="target === 'drug-target'">
<span class="icon"><i class="fa fa-crosshairs"></i></span>
Find Drug Targets
</p>
<button (click)="close()" class="delete" aria-label="close"></button>
</header>
<section class="modal-card-body">
<div *ngIf="target === 'drug' && hasBaits">
<div class="notification is-warning warning">
You have selected <i class="fa fa-virus"></i> viral proteins.
When finding drugs, make sure you have selected <i class="fa fa-dna"></i> host proteins only.
</div>
</div>
<div *ngIf="!analysis.canLaunchTask()">
<div class="notification is-warning warning">
You can only run {{maxTasks}} tasks at once. Please wait for one of them to finish or delete it from the task
list.
</div>
</div>
<div *ngIf="algorithm === 'keypathwayminer' && hasBaits">
<div class="notification is-warning warning">
You have selected <i class="fa fa-virus"></i> viral proteins.
If you want to use KeyPathwayMiner, please remove them because it cannot process them.
</div>
</div>
<div class="tabs is-toggle is-small is-fullwidth is-rounded has-tooltip">
<ul>
<li [class.is-active]="algorithm === algo.slug" *ngFor="let algo of algorithms">
<a (click)="algorithm = algo.slug" class="is-boxed is-medium">{{algo.name}}</a>
</li>
</ul>
</div>
<div *ngIf="algorithm==='trustrank'">
<p class="help info">
<span class="icon"><i class="fa fa-info"></i></span>
<a href="https://en.wikipedia.org/wiki/TrustRank" target="_blank">TrustRank</a>
is a node centrality measure that ranks nodes in a network based on how well they are connected to a
(trusted) set of seed nodes (Gyöngyi, Garcia-Molina, and Pedersen 2004).
</p>
<div class="field" *ngIf="target === 'drug'">
<label class="label">Indirect Drugs</label>
<app-toggle textOn="Include" textOff="Ignore" tooltipOn="Include indirect drugs."
tooltipOff="Exclude indirect drugs from the result."
[(value)]="trustrankIncludeIndirectDrugs"></app-toggle>
</div>
<div class="field" *ngIf="target === 'drug'">
<label class="label">Non-approved Drugs</label>
<app-toggle textOn="Include" textOff="Ignore" tooltipOn="Include non-approved drugs."
tooltipOff="Exclude non-approved drugs from the result."
[(value)]="trustrankIncludeNonApprovedDrugs"></app-toggle>
</div>
<div class="field">
<label class="label" for="trustrank-df">Damping Factor</label>
<div class="control">
<input [(ngModel)]="trustrankDampingFactor" id="trustrank-df" class="input" type="number"
placeholder="Damping factor"
min="0" max="1"
required>