diff --git a/src/app/components/analysis-window/analysis-window.component.html b/src/app/components/analysis-window/analysis-window.component.html index 616582a40ad31e9980ced2167e645e8af394620c..fb25976ebf6fcea8da78255e266ec60ad3327cb5 100644 --- a/src/app/components/analysis-window/analysis-window.component.html +++ b/src/app/components/analysis-window/analysis-window.component.html @@ -118,7 +118,7 @@ <button class="button is-loading center">Loading</button> </div> <div class="image2"> - <img src="assets/legend11.png" width="200px"/> + <img src="assets/leg2.png" width="200px"/> </div> </div> <footer class="card-footer toolbar"> diff --git a/src/app/components/info-box/info-box.component.html b/src/app/components/info-box/info-box.component.html index 10455f2c8b0aadfa1a0641f89ed0527906928940..d8a0bbb9880108215c43f1b508a45d51fcfbf0d8 100644 --- a/src/app/components/info-box/info-box.component.html +++ b/src/app/components/info-box/info-box.component.html @@ -15,7 +15,7 @@ <div *ngIf="wrapper.type === 'virus'"> <p> <b><span>Virus:</span></b> - {{ wrapper.data.virusName }} + {{ wrapper.data.virusName.replace('V', 'V-') }} <span class="icon is-small"><i class="fas fa-virus"></i></span> </p> <p> diff --git a/src/app/components/query/query.component.html b/src/app/components/query/query.component.html index 09381933fe31267d3578154183787aa580cc2c5d..93bdd6289e73db3b68f390e7be664827dfd8bbd9 100644 --- a/src/app/components/query/query.component.html +++ b/src/app/components/query/query.component.html @@ -6,7 +6,7 @@ <b *ngIf="item.type == 'virus'"> {{item.data.effectName}}</b> <br/> <span><small *ngIf="item.type === 'virus'">Viral Protein</small><small *ngIf="item.type === 'host'">Host Protein</small> | </span> <span *ngIf="item.type == 'host'"><small>AC: <b>{{item.data.proteinAc}}</b></small> </span> - <span *ngIf="item.type == 'virus'"><small><b>{{item.data.virusName}}</b></small></span> + <span *ngIf="item.type == 'virus'"><small><b>{{item.data.virusName.replace('V', 'V-')}}</b></small></span> </ng-template> </ng-select> </div> diff --git a/src/app/pages/about-page/about-page.component.html b/src/app/pages/about-page/about-page.component.html index b5dd848b15db8d1e3a6e53ec7d6e8fee3d1db24d..a09989438c21c8f1d28ce38198848f8f56d698e9 100644 --- a/src/app/pages/about-page/about-page.component.html +++ b/src/app/pages/about-page/about-page.component.html @@ -3,7 +3,7 @@ <section class="hero is-small is-primary"> <div class="hero-body"> <div class="container"> - <h1 class="title">About COVex</h1> + <h1 class="title">About CoVex</h1> </div> </div> </section> @@ -17,13 +17,18 @@ <div class="content"> <p> <br> - COVex (Coronavirus Explorer) is a unique online network and systems medicine platform for data analysis that + CoVex (Coronavirus Explorer) is a unique online network and systems medicine platform for data analysis that integrates virus-human interactions for SARS-CoV-2 and SARS-CoV-1. It implements different network-based approaches for the identification of new drug targets and new repurposable drugs. <br> <br> For detailed information please visit our blog: <a href="https://www.exbio.de/exbio-vs-covid-part-1/"> https://www.exbio.de/exbio-vs-covid-part-1/</a> + <br> + <br> + We are constantly updating and integrating new data as it becomes available. + <br> + If you are interested to make your virus-human interactome data available via our platform, please contact us. </p> <h2 class="subtitle">General workflow of the platform</h2> @@ -36,12 +41,12 @@ <li>Find drugs associated with the subnetwork (TrustRank, closeness centrality).</li> <li>Download your results.</li> </ol> - <p>COVex also provides a quick analysis option to perform steps 3 to 5 (starting from the seed proteins) to + <p>CoVex also provides a quick analysis option to perform steps 3 to 5 (starting from the seed proteins) to return a list of drugs ranked by default using TrustRank.</p> <h2>Help/Contact information</h2> <ul> - <li>Systems and Network Medicine: Sepideh Sadegh (sadegh_AT_zw.tum.de)</li> + <li>Systems and Network Medicine: Sepideh Sadegh (sadegh_AT_wzw.tum.de)</li> <li>Web platform: Julian Matschinske (julian.matschinske_AT_wzw.tum.de)</li> <li>Project coordination: Prof. Dr. Jan Baumbach (jan.baumbach_AT_wzw.tum.de)</li> <li>Lab Website: <a href="http://www.exbio.de">http://www.exbio.de</a> </li> diff --git a/src/app/pages/explorer-page/explorer-page.component.html b/src/app/pages/explorer-page/explorer-page.component.html index 576dd2b03f0ce3e833a4ed139fd5ddc5eae21dc0..4d3a7efc1b19bd58ec16ec057b572e7456686e96 100644 --- a/src/app/pages/explorer-page/explorer-page.component.html +++ b/src/app/pages/explorer-page/explorer-page.component.html @@ -154,7 +154,7 @@ <button class="button is-loading center" alt="loading...">Loading</button> </div> <div class="image2"> - <img src="assets/legend1.png" width="160px"/> + <img src="assets/leg1.png" width="180px"/> </div> </div> </div> diff --git a/src/app/pages/explorer-page/explorer-page.component.ts b/src/app/pages/explorer-page/explorer-page.component.ts index 3611926b8ab28278b9dce15e1e9141f01c952fdb..795be71cbe6d6bbdaa6d10e1ae457c05e1f44da2 100644 --- a/src/app/pages/explorer-page/explorer-page.component.ts +++ b/src/app/pages/explorer-page/explorer-page.component.ts @@ -86,7 +86,7 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit { hostTarget: 'Human brain and fetal brain cDNA libraries in yeast strains', method: 'High-Throughput Yeast Two Hybrid Screen (HTY2H) and validations with Lumier assay, ' + 'as well as experimentally validated interactions from 20 publications.', - source: null, + source: ['https://www.ncbi.nlm.nih.gov/pubmed/22046132', 'NCBI'], year: 2011, datasetNames: 'Pfefferle et al., 2011', backendId: 'SARS_CoV1', @@ -98,8 +98,8 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit { hostTarget: 'Different human cell lines', method: 'Literature curation, interactions from 14 publications, which have experimental validation by at ' + 'least one of the following assays: co-immunoprecipitation, two hybrid, pull-down, mass spectrometry.', - source: null, - year: null, + source: ['http://virhostnet.prabi.fr/', 'VirHostNet 2.0'], + year: 2014, datasetNames: 'VirHostNet 2.0', backendId: 'SARS_CoV1', data: [['VirHostNet', 'SARS-CoV1']] diff --git a/src/assets/leg1.png b/src/assets/leg1.png new file mode 100644 index 0000000000000000000000000000000000000000..27b9c170ece6fadcfe398cbd099aa798813c68e0 Binary files /dev/null and b/src/assets/leg1.png differ diff --git a/src/assets/leg2.png b/src/assets/leg2.png new file mode 100644 index 0000000000000000000000000000000000000000..c8929d5311bed616aef8ea32ff2f4944b7aa7e58 Binary files /dev/null and b/src/assets/leg2.png differ diff --git a/src/assets/legend_main_network.png b/src/assets/legend_main_network.png new file mode 100644 index 0000000000000000000000000000000000000000..10a794f6bff460b03265f2484549e2c07337debd Binary files /dev/null and b/src/assets/legend_main_network.png differ