From 9b10e7ed697f8d6cbfbca09bab4b4c8d66f40ce7 Mon Sep 17 00:00:00 2001
From: AndiMajore <andi.majore@googlemail.com>
Date: Tue, 22 Nov 2022 20:28:29 +0100
Subject: [PATCH] small layout updates; security fixes; piechart visualization
update
---
package-lock.json | 1269 +++++++----------
package.json | 3 +-
.../analysis-panel.component.html | 8 +-
.../analysis-panel.component.scss | 4 +
.../explorer-page.component.html | 7 +-
.../explorer-page.component.scss | 39 +-
.../netex-controller.service.ts | 2 -
src/app/utils.ts | 17 +-
src/index.html | 24 +-
src/stylesheets/bulma.scss | 2 +-
src/stylesheets/styles.scss | 7 +-
src/stylesheets/variables.scss | 2 +-
12 files changed, 615 insertions(+), 769 deletions(-)
diff --git a/package-lock.json b/package-lock.json
index a4da3c15..cc558286 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -588,9 +588,9 @@
}
},
"node_modules/@angular/animations": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/animations/-/animations-12.2.16.tgz",
- "integrity": "sha512-Kf6C7Ta+fCMq5DvT9JNVhBkcECrqFa3wumiC6ssGo5sNaEzXz+tlep9ZgEbqfxSn7gAN7L1DgsbS9u0O6tbUkg==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/animations/-/animations-12.2.17.tgz",
+ "integrity": "sha512-WVUcvKvr6wr9Nf3I2ksu5bFJ5xHhby4UEBTvOAdLpDqic+dzqtzVwAktDRprBSdxKQk1OlTw6jD4MsVEDKnZTg==",
"dependencies": {
"tslib": "^2.2.0"
},
@@ -598,7 +598,7 @@
"node": "^12.14.1 || >=14.0.0"
},
"peerDependencies": {
- "@angular/core": "12.2.16"
+ "@angular/core": "12.2.17"
}
},
"node_modules/@angular/cdk": {
@@ -654,9 +654,9 @@
}
},
"node_modules/@angular/common": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/common/-/common-12.2.16.tgz",
- "integrity": "sha512-FEqTXTEsnbDInqV1yFlm97Tz1OFqZS5t0TUkm8gzXRgpIce/F/jLwAg0u1VQkgOsno6cNm0xTWPoZgu85NI4ug==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/common/-/common-12.2.17.tgz",
+ "integrity": "sha512-/Rc83mzlL6YZScYTzg+Ng2hiCSf3jUVHAfQ8cyLOIMj/y8863Q+DMLVWW+ttvHwCjEFY44pC8IPyBl5FmSJYHg==",
"dependencies": {
"tslib": "^2.2.0"
},
@@ -664,14 +664,14 @@
"node": "^12.14.1 || >=14.0.0"
},
"peerDependencies": {
- "@angular/core": "12.2.16",
+ "@angular/core": "12.2.17",
"rxjs": "^6.5.3 || ^7.0.0"
}
},
"node_modules/@angular/compiler": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/compiler/-/compiler-12.2.16.tgz",
- "integrity": "sha512-nsYEw+yu8QyeqPf9nAmG419i1mtGM4v8+U+S3eQHQFXTgJzLymMykWHYu2ETdjUpNSLK6xcIQDBWtWnWSfJjAA==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/compiler/-/compiler-12.2.17.tgz",
+ "integrity": "sha512-dxM1CxzvEJPk6ShJngkW5j5BejBloxQNi+fJi+F8P/GN/Rj7vJUf0JxL+TUt1+Iv575V4NidJDKKikk6K485CA==",
"dependencies": {
"tslib": "^2.2.0"
},
@@ -680,9 +680,9 @@
}
},
"node_modules/@angular/compiler-cli": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/compiler-cli/-/compiler-cli-12.2.16.tgz",
- "integrity": "sha512-tlalh8SJvdCWbUPRUR5GamaP+wSc/GuCsoUZpSbcczGKgSlbaEVXUYtVXm8/wuT6Slk2sSEbRs7tXGF2i7qxVw==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/compiler-cli/-/compiler-cli-12.2.17.tgz",
+ "integrity": "sha512-gJJlnDr8Fhs6z0hH0Y/5GC1YAgHY+sRh2BUrbDu+nIUubyyOVYSyQdL1jwEfCSIZl1GSg+4b4thU7pp7HtmX8g==",
"dependencies": {
"@babel/core": "^7.8.6",
"@babel/types": "^7.8.6",
@@ -709,7 +709,7 @@
"node": "^12.14.1 || >=14.0.0"
},
"peerDependencies": {
- "@angular/compiler": "12.2.16",
+ "@angular/compiler": "12.2.17",
"typescript": ">=4.2.3 <4.4"
}
},
@@ -722,9 +722,9 @@
}
},
"node_modules/@angular/core": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/core/-/core-12.2.16.tgz",
- "integrity": "sha512-jsmvaRdAfng99z2a9mAmkfcsCE1wm+tBYVDxnc5JquSXznwtncjzcoc2X0J0dzrkCDvzFfpTsZ9vehylytBc+A==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/core/-/core-12.2.17.tgz",
+ "integrity": "sha512-XUvTgU0D8XqNH5Y7UlTMk/XjUQaEGC0kZxhw/QSSQr65WrXtXmcD4d8Cg84TJ52uGXmf7IAruKvtbvu1Mbmvug==",
"dependencies": {
"tslib": "^2.2.0"
},
@@ -737,9 +737,9 @@
}
},
"node_modules/@angular/elements": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/elements/-/elements-12.2.16.tgz",
- "integrity": "sha512-tOTf6FvnxZg/TjrmsbowHjrTYVl6WhTOQk3G4aYicrf+57a67L12F44Illr7I6preIvH5NepHivMTKN5rNBAmg==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/elements/-/elements-12.2.17.tgz",
+ "integrity": "sha512-aQKcp2ZYqkZ7Ss5/72IkN3rA5d2YeHQ1fFyvNiVekSnUBWw/2pCIrfOEAuTBLRWeBKvV1FyZU/7DzSgwQxDxsA==",
"dependencies": {
"tslib": "^2.2.0"
},
@@ -747,15 +747,15 @@
"node": "^12.14.1 || >=14.0.0"
},
"peerDependencies": {
- "@angular/core": "12.2.16",
- "@angular/platform-browser": "12.2.16",
+ "@angular/core": "12.2.17",
+ "@angular/platform-browser": "12.2.17",
"rxjs": "^6.5.3 || ^7.0.0"
}
},
"node_modules/@angular/forms": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/forms/-/forms-12.2.16.tgz",
- "integrity": "sha512-sb+gpNun5aN7CZfHXS6X7vJcd/0A1P/gRBZpYtQTzBYnqEFCOFIvR62eb05aHQ4JhgKaSPpIXrbz/bAwY/njZw==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/forms/-/forms-12.2.17.tgz",
+ "integrity": "sha512-iOIAz5OR6yLWuNTSOSDqAffQ0FU71yw1QsOmltU/hBsO6H6smsIKVe8VlFa4SnBSAyVZXf/OhDRJ8gOqQT09mw==",
"dependencies": {
"tslib": "^2.2.0"
},
@@ -763,25 +763,25 @@
"node": "^12.14.1 || >=14.0.0"
},
"peerDependencies": {
- "@angular/common": "12.2.16",
- "@angular/core": "12.2.16",
- "@angular/platform-browser": "12.2.16",
+ "@angular/common": "12.2.17",
+ "@angular/core": "12.2.17",
+ "@angular/platform-browser": "12.2.17",
"rxjs": "^6.5.3 || ^7.0.0"
}
},
"node_modules/@angular/language-service": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/language-service/-/language-service-12.2.16.tgz",
- "integrity": "sha512-eDOd46Lu+4Nc/UA9q4G1xUTeIT2JXDdpedSRCk1fM+trYUZm7Xy2FZasP3pUSdtz04wt0kV9Mi5i3oCxfqU2Wg==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/language-service/-/language-service-12.2.17.tgz",
+ "integrity": "sha512-mloPdK9iWLR3KQDE85e2k2iuIDsEr9gyFla3QI7UOVbzrsazRADxQxc5WHeDPxNbzTMjCYrcw8Jyc7WHssAPGw==",
"dev": true,
"engines": {
"node": "^12.14.1 || >=14.0.0"
}
},
"node_modules/@angular/localize": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/localize/-/localize-12.2.16.tgz",
- "integrity": "sha512-peWauKtqy7XG5OiG9L4uLg/yIMw0b/ipKOiovzpuj+DCghmeuYzle5kjCLvWydFeQqBoIdf2kcJYeskrYCAHfQ==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/localize/-/localize-12.2.17.tgz",
+ "integrity": "sha512-F87zH7TRLpjSlVUA2sAMkDHkF0ikcDVXciMlwlahcjX+ShL1q+iwddT0A4MOPyYTpXqfKAXniIvEK+C0OFdoAA==",
"dependencies": {
"@babel/core": "7.8.3",
"glob": "7.1.7",
@@ -796,8 +796,8 @@
"node": "^12.14.1 || >=14.0.0"
},
"peerDependencies": {
- "@angular/compiler": "12.2.16",
- "@angular/compiler-cli": "12.2.16"
+ "@angular/compiler": "12.2.17",
+ "@angular/compiler-cli": "12.2.17"
}
},
"node_modules/@angular/localize/node_modules/@babel/core": {
@@ -862,9 +862,9 @@
}
},
"node_modules/@angular/platform-browser": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/platform-browser/-/platform-browser-12.2.16.tgz",
- "integrity": "sha512-T855ppLeQO6hRHi7lGf5fwPoUVt+c0h2rgkV5jHElc3ylaGnhecmZc6fnWLX4pw82TMJUgUV88CY8JCFabJWwg==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/platform-browser/-/platform-browser-12.2.17.tgz",
+ "integrity": "sha512-fxs0FDEnS9mzd36u0bHd6TbCvRC9pqK0YCWNnoLCf5ALQtyIL8CpgGNjOMnO8mCEl5l9QTFCDvKOn4V3p7E/dg==",
"dependencies": {
"tslib": "^2.2.0"
},
@@ -872,9 +872,9 @@
"node": "^12.14.1 || >=14.0.0"
},
"peerDependencies": {
- "@angular/animations": "12.2.16",
- "@angular/common": "12.2.16",
- "@angular/core": "12.2.16"
+ "@angular/animations": "12.2.17",
+ "@angular/common": "12.2.17",
+ "@angular/core": "12.2.17"
},
"peerDependenciesMeta": {
"@angular/animations": {
@@ -883,9 +883,9 @@
}
},
"node_modules/@angular/platform-browser-dynamic": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/platform-browser-dynamic/-/platform-browser-dynamic-12.2.16.tgz",
- "integrity": "sha512-XGxoACAMW/bc3atiVRpaiYwU4LkobYwVzwlxTT/BxOfsdt8ILb5wU8Fx1TMKNECOQHSGdK0qqhch4pTBZ3cb2g==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/platform-browser-dynamic/-/platform-browser-dynamic-12.2.17.tgz",
+ "integrity": "sha512-2v7R5l+4ULSNLviKVTHCqn6iNFgY1M/+HtM1ZcM72V4cVVsXqXUAh7WV4sk4l4ECsExKxQoc6JlVtPUub8cCKA==",
"dependencies": {
"tslib": "^2.2.0"
},
@@ -893,16 +893,16 @@
"node": "^12.14.1 || >=14.0.0"
},
"peerDependencies": {
- "@angular/common": "12.2.16",
- "@angular/compiler": "12.2.16",
- "@angular/core": "12.2.16",
- "@angular/platform-browser": "12.2.16"
+ "@angular/common": "12.2.17",
+ "@angular/compiler": "12.2.17",
+ "@angular/core": "12.2.17",
+ "@angular/platform-browser": "12.2.17"
}
},
"node_modules/@angular/router": {
- "version": "12.2.16",
- "resolved": "https://registry.npmjs.org/@angular/router/-/router-12.2.16.tgz",
- "integrity": "sha512-LuFXSMIvX/VrB4jbYhigG2Y2pGQ9ULsSBUwDWwQCf4kr0eVI37LBJ2Vr74GBEznjgQ0UmWE89E+XYI80UhERTw==",
+ "version": "12.2.17",
+ "resolved": "https://registry.npmjs.org/@angular/router/-/router-12.2.17.tgz",
+ "integrity": "sha512-GKvEMUpLe157izpHLiS4bCZllqOj+MWhfWbhvR0DHFpE9FtkcDjBseTsWqQmyA1gqtRblO1Zn/1E33l9uaGMqw==",
"dependencies": {
"tslib": "^2.2.0"
},
@@ -910,9 +910,9 @@
"node": "^12.14.1 || >=14.0.0"
},
"peerDependencies": {
- "@angular/common": "12.2.16",
- "@angular/core": "12.2.16",
- "@angular/platform-browser": "12.2.16",
+ "@angular/common": "12.2.17",
+ "@angular/core": "12.2.17",
+ "@angular/platform-browser": "12.2.17",
"rxjs": "^6.5.3 || ^7.0.0"
}
},
@@ -934,9 +934,9 @@
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},
"node_modules/@babel/compat-data": {
- "version": "7.20.0",
- "resolved": "https://registry.npmjs.org/@babel/compat-data/-/compat-data-7.20.0.tgz",
- "integrity": "sha512-Gt9jszFJYq7qzXVK4slhc6NzJXnOVmRECWcVjF/T23rNXD9NtWQ0W3qxdg+p9wWIB+VQw3GYV/U2Ha9bRTfs4w==",
+ "version": "7.20.1",
+ "resolved": "https://registry.npmjs.org/@babel/compat-data/-/compat-data-7.20.1.tgz",
+ "integrity": "sha512-EWZ4mE2diW3QALKvDMiXnbZpRvlj+nayZ112nK93SnhqOtpdsbVD4W+2tEoT3YNBAG9RBR0ISY758ZkOgsn6pQ==",
"engines": {
"node": ">=6.9.0"
}
@@ -1058,9 +1058,9 @@
}
},
"node_modules/@babel/helper-create-class-features-plugin": {
- "version": "7.19.0",
- "resolved": "https://registry.npmjs.org/@babel/helper-create-class-features-plugin/-/helper-create-class-features-plugin-7.19.0.tgz",
- "integrity": "sha512-NRz8DwF4jT3UfrmUoZjd0Uph9HQnP30t7Ash+weACcyNkiYTywpIjDBgReJMKgr+n86sn2nPVVmJ28Dm053Kqw==",
+ "version": "7.20.2",
+ "resolved": "https://registry.npmjs.org/@babel/helper-create-class-features-plugin/-/helper-create-class-features-plugin-7.20.2.tgz",
+ "integrity": "sha512-k22GoYRAHPYr9I+Gvy2ZQlAe5mGy8BqWst2wRt8cwIufWTxrsVshhIBvYNqC80N0GSFWTsqRVexOtfzlgOEDvA==",
"dev": true,
"dependencies": {
"@babel/helper-annotate-as-pure": "^7.18.6",
@@ -1068,7 +1068,7 @@
"@babel/helper-function-name": "^7.19.0",
"@babel/helper-member-expression-to-functions": "^7.18.9",
"@babel/helper-optimise-call-expression": "^7.18.6",
- "@babel/helper-replace-supers": "^7.18.9",
+ "@babel/helper-replace-supers": "^7.19.1",
"@babel/helper-split-export-declaration": "^7.18.6"
},
"engines": {
@@ -1226,18 +1226,18 @@
}
},
"node_modules/@babel/helper-module-transforms": {
- "version": "7.19.6",
- "resolved": "https://registry.npmjs.org/@babel/helper-module-transforms/-/helper-module-transforms-7.19.6.tgz",
- "integrity": "sha512-fCmcfQo/KYr/VXXDIyd3CBGZ6AFhPFy1TfSEJ+PilGVlQT6jcbqtHAM4C1EciRqMza7/TpOUZliuSH+U6HAhJw==",
+ "version": "7.20.2",
+ "resolved": "https://registry.npmjs.org/@babel/helper-module-transforms/-/helper-module-transforms-7.20.2.tgz",
+ "integrity": "sha512-zvBKyJXRbmK07XhMuujYoJ48B5yvvmM6+wcpv6Ivj4Yg6qO7NOZOSnvZN9CRl1zz1Z4cKf8YejmCMh8clOoOeA==",
"dependencies": {
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"@babel/helper-module-imports": "^7.18.6",
- "@babel/helper-simple-access": "^7.19.4",
+ "@babel/helper-simple-access": "^7.20.2",
"@babel/helper-split-export-declaration": "^7.18.6",
"@babel/helper-validator-identifier": "^7.19.1",
"@babel/template": "^7.18.10",
- "@babel/traverse": "^7.19.6",
- "@babel/types": "^7.19.4"
+ "@babel/traverse": "^7.20.1",
+ "@babel/types": "^7.20.2"
},
"engines": {
"node": ">=6.9.0"
@@ -1269,9 +1269,9 @@
}
},
"node_modules/@babel/helper-plugin-utils": {
- "version": "7.19.0",
- "resolved": "https://registry.npmjs.org/@babel/helper-plugin-utils/-/helper-plugin-utils-7.19.0.tgz",
- "integrity": "sha512-40Ryx7I8mT+0gaNxm8JGTZFUITNqdLAgdg0hXzeVZxVD6nFsdhQvip6v8dqkRHzsz1VFpFAaOCHNn0vKBL7Czw==",
+ "version": "7.20.2",
+ "resolved": "https://registry.npmjs.org/@babel/helper-plugin-utils/-/helper-plugin-utils-7.20.2.tgz",
+ "integrity": "sha512-8RvlJG2mj4huQ4pZ+rU9lqKi9ZKiRmuvGuM2HlWmkmgOhbs6zEAw6IEiJ5cQqGbDzGZOhwuOQNtZMi/ENLjZoQ==",
"dev": true,
"engines": {
"node": ">=6.9.0"
@@ -1324,11 +1324,11 @@
}
},
"node_modules/@babel/helper-simple-access": {
- "version": "7.19.4",
- "resolved": "https://registry.npmjs.org/@babel/helper-simple-access/-/helper-simple-access-7.19.4.tgz",
- "integrity": "sha512-f9Xq6WqBFqaDfbCzn2w85hwklswz5qsKlh7f08w4Y9yhJHpnNC0QemtSkK5YyOY8kPGvyiwdzZksGUhnGdaUIg==",
+ "version": "7.20.2",
+ "resolved": "https://registry.npmjs.org/@babel/helper-simple-access/-/helper-simple-access-7.20.2.tgz",
+ "integrity": "sha512-+0woI/WPq59IrqDYbVGfshjT5Dmk/nnbdpcF8SnMhhXObpTq2KNBdLFRFrkVdbDOyUmHBCxzm5FHV1rACIkIbA==",
"dependencies": {
- "@babel/types": "^7.19.4"
+ "@babel/types": "^7.20.2"
},
"engines": {
"node": ">=6.9.0"
@@ -1411,12 +1411,12 @@
}
},
"node_modules/@babel/helpers": {
- "version": "7.20.0",
- "resolved": "https://registry.npmjs.org/@babel/helpers/-/helpers-7.20.0.tgz",
- "integrity": "sha512-aGMjYraN0zosCEthoGLdqot1oRsmxVTQRHadsUPz5QM44Zej2PYRz7XiDE7GqnkZnNtLbOuxqoZw42vkU7+XEQ==",
+ "version": "7.20.1",
+ "resolved": "https://registry.npmjs.org/@babel/helpers/-/helpers-7.20.1.tgz",
+ "integrity": "sha512-J77mUVaDTUJFZ5BpP6mMn6OIl3rEWymk2ZxDBQJUG3P+PbmyMcF3bYWvz0ma69Af1oobDqT/iAsvzhB58xhQUg==",
"dependencies": {
"@babel/template": "^7.18.10",
- "@babel/traverse": "^7.20.0",
+ "@babel/traverse": "^7.20.1",
"@babel/types": "^7.20.0"
},
"engines": {
@@ -1450,9 +1450,9 @@
}
},
"node_modules/@babel/parser": {
- "version": "7.20.0",
- "resolved": "https://registry.npmjs.org/@babel/parser/-/parser-7.20.0.tgz",
- "integrity": "sha512-G9VgAhEaICnz8iiJeGJQyVl6J2nTjbW0xeisva0PK6XcKsga7BIaqm4ZF8Rg1Wbaqmy6znspNqhPaPkyukujzg==",
+ "version": "7.20.3",
+ "resolved": "https://registry.npmjs.org/@babel/parser/-/parser-7.20.3.tgz",
+ "integrity": "sha512-OP/s5a94frIPXwjzEcv5S/tpQfc6XhxYUnmWpgdqMWGgYCuErA3SzozaRAMQgSZWKeTJxht9aWAkUY+0UzvOFg==",
"bin": {
"parser": "bin/babel-parser.js"
},
@@ -1624,16 +1624,16 @@
}
},
"node_modules/@babel/plugin-proposal-object-rest-spread": {
- "version": "7.19.4",
- "resolved": "https://registry.npmjs.org/@babel/plugin-proposal-object-rest-spread/-/plugin-proposal-object-rest-spread-7.19.4.tgz",
- "integrity": "sha512-wHmj6LDxVDnL+3WhXteUBaoM1aVILZODAUjg11kHqG4cOlfgMQGxw6aCgvrXrmaJR3Bn14oZhImyCPZzRpC93Q==",
+ "version": "7.20.2",
+ "resolved": "https://registry.npmjs.org/@babel/plugin-proposal-object-rest-spread/-/plugin-proposal-object-rest-spread-7.20.2.tgz",
+ "integrity": "sha512-Ks6uej9WFK+fvIMesSqbAto5dD8Dz4VuuFvGJFKgIGSkJuRGcrwGECPA1fDgQK3/DbExBJpEkTeYeB8geIFCSQ==",
"dev": true,
"dependencies": {
- "@babel/compat-data": "^7.19.4",
- "@babel/helper-compilation-targets": "^7.19.3",
- "@babel/helper-plugin-utils": "^7.19.0",
+ "@babel/compat-data": "^7.20.1",
+ "@babel/helper-compilation-targets": "^7.20.0",
+ "@babel/helper-plugin-utils": "^7.20.2",
"@babel/plugin-syntax-object-rest-spread": "^7.8.3",
- "@babel/plugin-transform-parameters": "^7.18.8"
+ "@babel/plugin-transform-parameters": "^7.20.1"
},
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@@ -10674,7 +10604,6 @@
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@@ -10744,13 +10673,12 @@
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"libnpmdiff": "^4.0.5",
- "libnpmexec": "^4.0.13",
- "libnpmfund": "^3.0.4",
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@@ -10823,14 +10751,13 @@
"npx": "bin/npx-cli.js"
},
"engines": {
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+ "node": "^12.13.0 || ^14.15.0 || >=16.0.0"
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- "dev": true,
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@@ -10839,7 +10766,6 @@
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- "dev": true
+ "integrity": "sha512-EPfafl6JL5/rU+ot6P3gRSCpPDW5VmIzX959Ob1+ySFUuuYHWHekXpwdUZcKP5C+DS4GEtdJluwBjnsNDl+fSA=="
},
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@@ -10889,7 +10812,6 @@
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- "dev": true,
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@@ -10946,7 +10867,7 @@
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},
"node_modules/npm/node_modules/@npmcli/arborist": {
- "version": "5.6.2",
+ "version": "5.6.3",
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"license": "ISC",
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@@ -10963,6 +10884,7 @@
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"cacache": "^16.1.3",
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+ "hosted-git-info": "^5.2.1",
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"json-stringify-nice": "^1.1.4",
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@@ -11702,7 +11624,7 @@
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},
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- "version": "5.1.0",
+ "version": "5.2.1",
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@@ -11950,11 +11872,11 @@
}
},
"node_modules/npm/node_modules/libnpmexec": {
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+ "version": "4.0.14",
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"license": "ISC",
"dependencies": {
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+ "@npmcli/arborist": "^5.6.3",
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@@ -11974,11 +11896,11 @@
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"node_modules/npm/node_modules/libnpmfund": {
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+ "version": "3.0.5",
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"license": "ISC",
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+ "@npmcli/arborist": "^5.6.3"
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- "dev": true,
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@@ -13566,7 +13487,6 @@
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- "dev": true,
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@@ -14213,12 +14132,12 @@
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+ "version": "5.1.3",
+ "resolved": "https://registry.npmjs.org/postcss-convert-values/-/postcss-convert-values-5.1.3.tgz",
+ "integrity": "sha512-82pC1xkJZtcJEfiLw6UXnXVXScgtBrjlO5CBmuDQc+dlb88ZYheFsjTn40+zBVi3DkfF7iezO0nJUPLcJK3pvA==",
"dev": true,
"dependencies": {
- "browserslist": "^4.20.3",
+ "browserslist": "^4.21.4",
"postcss-value-parser": "^4.2.0"
},
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@@ -14940,13 +14859,13 @@
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+ "version": "5.1.7",
+ "resolved": "https://registry.npmjs.org/postcss-merge-longhand/-/postcss-merge-longhand-5.1.7.tgz",
+ "integrity": "sha512-YCI9gZB+PLNskrK0BB3/2OzPnGhPkBEwmwhfYk1ilBHYVAZB7/tkTHFBAnCrvBBOmeYyMYw3DMjT55SyxMBzjQ==",
"dev": true,
"dependencies": {
"postcss-value-parser": "^4.2.0",
- "stylehacks": "^5.1.0"
+ "stylehacks": "^5.1.1"
},
"engines": {
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@@ -14956,12 +14875,12 @@
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+ "version": "5.1.3",
+ "resolved": "https://registry.npmjs.org/postcss-merge-rules/-/postcss-merge-rules-5.1.3.tgz",
+ "integrity": "sha512-LbLd7uFC00vpOuMvyZop8+vvhnfRGpp2S+IMQKeuOZZapPRY4SMq5ErjQeHbHsjCUgJkRNrlU+LmxsKIqPKQlA==",
"dev": true,
"dependencies": {
- "browserslist": "^4.16.6",
+ "browserslist": "^4.21.4",
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@@ -15006,12 +14925,12 @@
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"dev": true,
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@@ -28168,9 +28009,9 @@
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- "resolved": "https://registry.npmjs.org/minimatch/-/minimatch-3.0.4.tgz",
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+ "resolved": "https://registry.npmjs.org/minimatch/-/minimatch-3.0.8.tgz",
+ "integrity": "sha512-6FsRAQsxQ61mw+qP1ZzbL9Bc78x2p5OqNgNpnoAFLTrX8n5Kxph0CsnhmKKNXTWjXqU5L0pGPR7hYk+XWZr60Q==",
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- "dev": true,
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- "dev": true,
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- "dev": true,
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- "dev": true,
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- "dev": true
+ "integrity": "sha512-vVqVZQyf3WLx2Shd0qJ9xuvqgAyKPLAiqITEtqW0oIUjzo3PePDd6fW9iFz30ef7Ysp/oiWqbhszeGWW2T6Gzw=="
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@@ -28359,8 +28191,7 @@
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- "dev": true
+ "integrity": "sha512-+EUsqGPLsM+j/zdChZjsnX51g4XrHFOIXwfnCVPGlQk/k5giakcKsuxCObBRu6DSm9opw/O6slWbJdghQM4bBg=="
},
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@@ -28411,7 +28242,6 @@
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- "dev": true,
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@@ -28429,7 +28259,6 @@
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- "dev": true,
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}
@@ -28452,7 +28281,6 @@
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- "dev": true,
"requires": {
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}
@@ -28475,18 +28303,17 @@
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},
"npm": {
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- "resolved": "https://registry.npmjs.org/npm/-/npm-8.19.2.tgz",
- "integrity": "sha512-MWkISVv5f7iZbfNkry5/5YBqSYJEDAKSJdL+uzSQuyLg+hgLQUyZynu3SH6bOZlvR9ZvJYk2EiJO6B1r+ynwHg==",
+ "version": "8.19.3",
+ "resolved": "https://registry.npmjs.org/npm/-/npm-8.19.3.tgz",
+ "integrity": "sha512-0QjmyPtDxSyMWWD8I91QGbrgx9KzbV6C9FK1liEb/K0zppiZkr5KxXc990G+LzPwBHDfRjUBlO9T1qZ08vl9mA==",
"requires": {
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- "@npmcli/arborist": "^5.6.2",
+ "@npmcli/arborist": "^5.6.3",
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"@npmcli/fs": "^2.1.0",
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- "@npmcli/promise-spawn": "*",
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@@ -28497,18 +28324,18 @@
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"fastest-levenshtein": "^1.0.12",
- "fs-minipass": "*",
+ "fs-minipass": "^2.1.0",
"glob": "^8.0.1",
"graceful-fs": "^4.2.10",
- "hosted-git-info": "^5.1.0",
+ "hosted-git-info": "^5.2.1",
"ini": "^3.0.1",
"init-package-json": "^3.0.2",
"is-cidr": "^4.0.2",
"json-parse-even-better-errors": "^2.3.1",
"libnpmaccess": "^6.0.4",
"libnpmdiff": "^4.0.5",
- "libnpmexec": "^4.0.13",
- "libnpmfund": "^3.0.4",
+ "libnpmexec": "^4.0.14",
+ "libnpmfund": "^3.0.5",
"libnpmhook": "^8.0.4",
"libnpmorg": "^4.0.4",
"libnpmpack": "^4.1.3",
@@ -28517,7 +28344,7 @@
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+ "minimatch": "~3.0.5",
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"minipass-pipeline": "^1.2.4",
"mkdirp": "^1.0.4",
@@ -28569,7 +28396,7 @@
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},
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- "version": "5.6.2",
+ "version": "5.6.3",
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"requires": {
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@@ -28585,9 +28412,10 @@
"bin-links": "^3.0.3",
"cacache": "^16.1.3",
"common-ancestor-path": "^1.0.1",
+ "hosted-git-info": "^5.2.1",
"json-parse-even-better-errors": "^2.3.1",
"json-stringify-nice": "^1.1.4",
- "minimatch": "^5.1.0",
+ "minimatch": "~3.0.5",
"mkdirp": "^1.0.4",
"mkdirp-infer-owner": "^2.0.0",
"nopt": "^6.0.0",
@@ -28681,7 +28509,7 @@
"requires": {
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"glob": "^8.0.1",
- "minimatch": "^5.0.1",
+ "minimatch": "~3.0.5",
"read-package-json-fast": "^2.0.3"
}
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@@ -29065,7 +28893,7 @@
"fs.realpath": "^1.0.0",
"inflight": "^1.0.4",
"inherits": "2",
- "minimatch": "^5.0.1",
+ "minimatch": "~3.0.5",
"once": "^1.3.0"
}
},
@@ -29089,7 +28917,7 @@
"bundled": true
},
"hosted-git-info": {
- "version": "5.1.0",
+ "version": "5.2.1",
"bundled": true,
"requires": {
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@@ -29135,7 +28963,7 @@
"version": "5.0.1",
"bundled": true,
"requires": {
- "minimatch": "^5.0.1"
+ "minimatch": "~3.0.5"
}
},
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@@ -29251,17 +29079,17 @@
"@npmcli/installed-package-contents": "^1.0.7",
"binary-extensions": "^2.2.0",
"diff": "^5.1.0",
- "minimatch": "^5.0.1",
+ "minimatch": "~3.0.5",
"npm-package-arg": "^9.0.1",
"pacote": "^13.6.1",
"tar": "^6.1.0"
}
},
"libnpmexec": {
- "version": "4.0.13",
+ "version": "4.0.14",
"bundled": true,
"requires": {
- "@npmcli/arborist": "^5.6.2",
+ "@npmcli/arborist": "^5.6.3",
"@npmcli/ci-detect": "^2.0.0",
"@npmcli/fs": "^2.1.1",
"@npmcli/run-script": "^4.2.0",
@@ -29278,10 +29106,10 @@
}
},
"libnpmfund": {
- "version": "3.0.4",
+ "version": "3.0.5",
"bundled": true,
"requires": {
- "@npmcli/arborist": "^5.6.2"
+ "@npmcli/arborist": "^5.6.3"
}
},
"libnpmhook": {
@@ -29496,7 +29324,7 @@
"fs.realpath": "^1.0.0",
"inflight": "^1.0.4",
"inherits": "2",
- "minimatch": "^3.1.1",
+ "minimatch": "~3.0.5",
"once": "^1.3.0",
"path-is-absolute": "^1.0.0"
}
@@ -29823,7 +29651,7 @@
"fs.realpath": "^1.0.0",
"inflight": "^1.0.4",
"inherits": "2",
- "minimatch": "^3.1.1",
+ "minimatch": "~3.0.5",
"once": "^1.3.0",
"path-is-absolute": "^1.0.0"
}
@@ -30056,7 +29884,6 @@
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"integrity": "sha512-x5DHup0SuyQcmL3s7Rx/YQ8sbw/Hzg0rj48eN0dV7hf5cmQq5PXIeioroH3raV1QC1yh3uTYuMThvEQF3iKgGQ==",
- "dev": true,
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}
@@ -30065,7 +29892,6 @@
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- "dev": true,
"requires": {
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}
@@ -30073,14 +29899,12 @@
"npm-normalize-package-bin": {
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"resolved": "https://registry.npmjs.org/npm-normalize-package-bin/-/npm-normalize-package-bin-1.0.1.tgz",
- "integrity": "sha512-EPfafl6JL5/rU+ot6P3gRSCpPDW5VmIzX959Ob1+ySFUuuYHWHekXpwdUZcKP5C+DS4GEtdJluwBjnsNDl+fSA==",
- "dev": true
+ "integrity": "sha512-EPfafl6JL5/rU+ot6P3gRSCpPDW5VmIzX959Ob1+ySFUuuYHWHekXpwdUZcKP5C+DS4GEtdJluwBjnsNDl+fSA=="
},
"npm-package-arg": {
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"resolved": "https://registry.npmjs.org/npm-package-arg/-/npm-package-arg-8.1.5.tgz",
"integrity": "sha512-LhgZrg0n0VgvzVdSm1oiZworPbTxYHUJCgtsJW8mGvlDpxTM1vSJc3m5QZeUkhAHIzbz3VCHd/R4osi1L1Tg/Q==",
- "dev": true,
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"semver": "^7.3.4",
@@ -30091,7 +29915,6 @@
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- "dev": true,
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@@ -30103,7 +29926,6 @@
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- "dev": true,
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"npm-normalize-package-bin": "^1.0.1",
@@ -30115,7 +29937,6 @@
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@@ -30138,7 +29959,6 @@
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@@ -30466,7 +30286,6 @@
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- "dev": true,
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@@ -30490,7 +30309,6 @@
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@@ -30965,12 +30783,12 @@
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+ "version": "5.1.3",
+ "resolved": "https://registry.npmjs.org/postcss-convert-values/-/postcss-convert-values-5.1.3.tgz",
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"dev": true,
"requires": {
- "browserslist": "^4.20.3",
+ "browserslist": "^4.21.4",
"postcss-value-parser": "^4.2.0"
}
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@@ -31472,22 +31290,22 @@
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- "integrity": "sha512-6C/UGF/3T5OE2CEbOuX7iNO63dnvqhGZeUnKkDeifebY0XqkkvrctYSZurpNE902LDf2yKwwPFgotnfSoPhQiw==",
+ "version": "5.1.7",
+ "resolved": "https://registry.npmjs.org/postcss-merge-longhand/-/postcss-merge-longhand-5.1.7.tgz",
+ "integrity": "sha512-YCI9gZB+PLNskrK0BB3/2OzPnGhPkBEwmwhfYk1ilBHYVAZB7/tkTHFBAnCrvBBOmeYyMYw3DMjT55SyxMBzjQ==",
"dev": true,
"requires": {
"postcss-value-parser": "^4.2.0",
- "stylehacks": "^5.1.0"
+ "stylehacks": "^5.1.1"
}
},
"postcss-merge-rules": {
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- "resolved": "https://registry.npmjs.org/postcss-merge-rules/-/postcss-merge-rules-5.1.2.tgz",
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+ "version": "5.1.3",
+ "resolved": "https://registry.npmjs.org/postcss-merge-rules/-/postcss-merge-rules-5.1.3.tgz",
+ "integrity": "sha512-LbLd7uFC00vpOuMvyZop8+vvhnfRGpp2S+IMQKeuOZZapPRY4SMq5ErjQeHbHsjCUgJkRNrlU+LmxsKIqPKQlA==",
"dev": true,
"requires": {
- "browserslist": "^4.16.6",
+ "browserslist": "^4.21.4",
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@@ -31514,12 +31332,12 @@
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+ "version": "5.1.4",
+ "resolved": "https://registry.npmjs.org/postcss-minify-params/-/postcss-minify-params-5.1.4.tgz",
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},
"yargs-parser": {
diff --git a/package.json b/package.json
index d418e909..3703ed23 100644
--- a/package.json
+++ b/package.json
@@ -80,6 +80,7 @@
"glob-parent": "5.1.2",
"node-forge": "1.3.0",
"@angular-devkit/build-angular": "~12.2.18",
- "@angular/core": "~12.2.16"
+ "@angular/core": "~12.2.16",
+ "minimatch": "~3.0.5"
}
}
diff --git a/src/app/components/analysis-panel/analysis-panel.component.html b/src/app/components/analysis-panel/analysis-panel.component.html
index f9885e4d..dbc01c5c 100644
--- a/src/app/components/analysis-panel/analysis-panel.component.html
+++ b/src/app/components/analysis-panel/analysis-panel.component.html
@@ -89,7 +89,7 @@
</ul>
</div>
<div
- class="tab-content meta"
+ class="tab-content meta parameter-tab"
*ngIf="task && task.info.done"
[class.is-visible]="tab === 'meta'"
>
@@ -114,7 +114,7 @@
</div>
<div class="columns m-1">
<div class="column">
- <table class="table is-narrow">
+ <table class="table parameter-table">
<tbody>
<tr
*ngIf="
@@ -248,7 +248,7 @@
Algorithm:
{{ algorithmNames["multisteiner"] }}
</h4>
- <table class="table is-narrow">
+ <table class="table parameter-table">
<tbody>
<tr>
<td>Number of Trees</td>
@@ -279,7 +279,7 @@
Algorithm:
{{ algorithmNames["closeness"] }}
</h4>
- <table class="table is-narrow">
+ <table class="table parameter-table">
<tbody>
<tr>
<td>Include indirect drugs</td>
diff --git a/src/app/components/analysis-panel/analysis-panel.component.scss b/src/app/components/analysis-panel/analysis-panel.component.scss
index e57f4632..57f131bb 100644
--- a/src/app/components/analysis-panel/analysis-panel.component.scss
+++ b/src/app/components/analysis-panel/analysis-panel.component.scss
@@ -28,6 +28,10 @@
height: $analysis-tab-header-height;
}
+.parameter-table, .parameter-tab {
+ width: 100% !important;
+}
+
.tab-content {
visibility: hidden;
position: absolute;
diff --git a/src/app/pages/explorer-page/explorer-page.component.html b/src/app/pages/explorer-page/explorer-page.component.html
index 127fbc5b..fe65af62 100644
--- a/src/app/pages/explorer-page/explorer-page.component.html
+++ b/src/app/pages/explorer-page/explorer-page.component.html
@@ -460,7 +460,7 @@
class="seed-selection"
[ngClass]="{ 'text-normal': 'drugstoneConfig.smallStyle' }"
>
- <div class="card-content overflow">
+ <div class="card-content">
<table
class="table selection-table"
*ngIf="analysis.getCount() > 0"
@@ -478,7 +478,7 @@
<td>Actions</td>
</tr>
</thead>
- <tbody>
+ <tbody class="overflow">
<tr *ngFor="let p of analysis.getSelection()">
<td>
<p class="is-capitalized">{{ p.data.label }}</p>
@@ -502,10 +502,11 @@
>
<p>{{ p.data.uniprotAc }}</p>
</td>
- <td>
+ <td style="text-align: center">
<button
(click)="analysis.removeItems([p])"
class="button is-small is-danger is-outlined has-tooltip"
+ [tooltipStyleClass]="'drgstn drgstn-tooltip drgstn-tooltip-top'"
tooltipPosition="top"
pTooltip="Remove from selection."
>
diff --git a/src/app/pages/explorer-page/explorer-page.component.scss b/src/app/pages/explorer-page/explorer-page.component.scss
index 323dcfd3..cd4da80f 100644
--- a/src/app/pages/explorer-page/explorer-page.component.scss
+++ b/src/app/pages/explorer-page/explorer-page.component.scss
@@ -10,6 +10,7 @@
.quick-find {
.notification {
padding: 1.25rem 1rem 1.25rem 1rem !important;
+
.digit {
color: rgba(255, 255, 255, 0.5);
font-size: 32px;
@@ -23,6 +24,7 @@
margin: auto 0;
font-weight: bold;
}
+
.digit-small {
color: rgba(255, 255, 255, 0.5);
font-size: 24px;
@@ -37,15 +39,18 @@
font-weight: bold;
}
}
+
.notification.small {
padding: 0.5rem 1rem !important;
}
+
.divisor-rapid {
margin-top: -10px;
margin-bottom: 10px;
text-align: center;
}
}
+
.card-content.quick-find.small {
padding: 0.5rem !important;
}
@@ -93,6 +98,7 @@
.card-footer {
font-size: 12px;
+
a {
padding: 3px;
}
@@ -104,6 +110,29 @@
.selection-table {
width: 100%;
+ display: block;
+
+ td {
+ vertical-align: middle !important;
+ }
+
+ thead, tbody {
+ width: 100%;
+ display: block !important;
+ }
+
+ thead, tbody tr {
+ width: 100%;
+ display: table !important;
+ table-layout: fixed;
+ }
+ app-fa-solid-icon{
+ margin-right: -6px !important;
+ }
+ p {
+ margin-bottom: 0 !important;
+ }
+
}
.task-list-container {
@@ -111,8 +140,8 @@
}
.uniprot p {
- max-width: 50px;
- white-space: nowrap;
- overflow: hidden;
- text-overflow: ellipsis;
-}
\ No newline at end of file
+ max-width: 50px;
+ white-space: nowrap;
+ overflow: hidden;
+ text-overflow: ellipsis;
+}
diff --git a/src/app/services/netex-controller/netex-controller.service.ts b/src/app/services/netex-controller/netex-controller.service.ts
index b818c301..8aa281b9 100644
--- a/src/app/services/netex-controller/netex-controller.service.ts
+++ b/src/app/services/netex-controller/netex-controller.service.ts
@@ -20,8 +20,6 @@ export class NetexControllerService {
}
public async getTasks(tokens): Promise<any> {
- console.log(this.drugstoneConfig.config.backendUrl)
- console.log(this.getBackend())
/**
* returns promise of tasks status
*/
diff --git a/src/app/utils.ts b/src/app/utils.ts
index 7cbf2ceb..b15943c9 100644
--- a/src/app/utils.ts
+++ b/src/app/utils.ts
@@ -234,6 +234,19 @@ export function pieChartContextRenderer({ctx, x, y, state: {selected, hover}, st
}
}
+ function colorToHex(color) {
+ if (color.startsWith('#')) {
+ return color;
+ }
+ if (color.startsWith('rgba')) {
+ return rgbToHex(color);
+ }
+ if (color.startsWith('rgb')) {
+ return rgbToHex(color);
+ }
+ return null;
+ }
+
function endShadow() {
if (style.shadow) {
// removing shadow application of future fill or stroke calls
@@ -248,7 +261,7 @@ export function pieChartContextRenderer({ctx, x, y, state: {selected, hover}, st
const lineOpacity = 0.6;
const fullCircle = 2 * Math.PI;
const fallbackColor = '#FF0000';
- const colorOrFallback = style.color ? style.color : fallbackColor;
+ const colorOrFallback = style.color ? colorToHex(style.color) : fallbackColor;
let outerBorderColor = style.borderColor;
if (selection) {
outerBorderColor = style.borderColor ? rgbaWithoutAToHex(style.borderColor) : fallbackColor;
@@ -266,7 +279,7 @@ export function pieChartContextRenderer({ctx, x, y, state: {selected, hover}, st
endShadow();
ctx.stroke();
- // prepare pi-chart
+ // draw pi-chart
ctx.fillStyle = hexToRGBA(colorOrFallback, fgOpacity);
ctx.beginPath();
diff --git a/src/index.html b/src/index.html
index f622bcde..264016c3 100644
--- a/src/index.html
+++ b/src/index.html
@@ -110,18 +110,18 @@ Export As Graphml Button<br>
<div style="max-width: 80vw; width: 1276px; height: 500px">
- <drugst-one id="tatata"
- groups='{ "edgeGroups":{"default":{"color":"#000000","groupName":"default edge"}}, "nodeGroups" : { "selectedNode": { "borderWidth": 3,"borderWidthSelected": 4,"color": { "border": "#C80BFD","highlight": {"border": "#C80BFD"}},"font": { "color": "#0000000","size": 14 }},"Protein":{"shape":"circle","groupName":"Protein","type":"Protein","color":"#C99AFFFF","font":{"color":"#FFFFFF"}}}}'
- config='{"identifier":"symbol","title":"ROBUST output network", "taskDrugName": "Drug Search", "showLegendNodes": true, "showLegendEdges": true, "showSidebar": "left", "showOverview": true, "legendPos": "left", "legendClass": "legend", "showQuery": true, "showItemSelector": true,"showSimpleAnalysis": false,"showAdvAnalysis": true,"showSelection": true,"showTasks": true,"showNetworkMenu": "right","showLegend": true,"showNetworkMenuButtonExpression": true, "showNetworkMenuButtonScreenshot": true,"showNetworkMenuButtonExportGraphml": true,"showNetworkMenuButtonAdjacentDrugs": true,"showNetworkMenuButtonCenter": true,"showConnectGenes": false,"networkMenuButtonAdjacentDrugsLabel": "Drugs","showNetworkMenuButtonAdjacentDisordersProteins": true,"networkMenuButtonAdjacentDisordersProteinsLabel": "Disorders (protein)","showNetworkMenuButtonAdjacentDisordersDrugs": true,"networkMenuButtonAdjacentDisordersDrugsLabel": "Disorders (drug)","showNetworkMenuButtonAnimation": true,"networkMenuButtonAnimationLabel": "Animation", "autofillEdges": true, "physicsOn": false,"useNedrexLicenced": true,"selfReferences": false, "interactionDrugProtein": "NeDRex", "indicationDrugDisorder": "NeDRex","nodeShadow": true,"edgeShadow": false, "algorithms": {"drug": ["trustrank", "closeness", "degree", "proximity"], "drug-target": ["trustrank", "multisteiner", "keypathwayminer", "degree", "closeness", "betweenness"]}, "associatedProteinDisorder": "NeDRex", "expandNetworkMenu": true}'
- network='{"nodes": [{"id":"PSEN1","group":"Protein","label":"PSEN1"},{"id":"PSEN2","group":"Protein","label":"PSEN2"},{"id":"APP","group":"Protein","label":"APP"},{"id":"APOE","group":"Protein","label":"APOE"},{"id":"RNF32","group":"Protein","label":"RNF32"},{"id":"STX5","group":"Protein","label":"STX5"},{"id":"TRAF3IP1","group":"Protein","label":"TRAF3IP1"},{"id":"PHB1","group":"Protein","label":"PHB1"},{"id":"MAPT","group":"Protein","label":"MAPT"},{"id":"ESR1","group":"Protein","label":"ESR1"},{"id":"IRF3","group":"Protein","label":"IRF3"},{"id":"DYNC1H1","group":"Protein","label":"DYNC1H1"},{"id":"CUL3","group":"Protein","label":"CUL3"},{"id":"HMGB1","group":"Protein","label":"HMGB1"},{"id":"DNAJC7","group":"Protein","label":"DNAJC7"},{"id":"NEFM","group":"Protein","label":"NEFM"},{"id":"DISC1","group":"Protein","label":"DISC1"},{"id":"PPP5C","group":"Protein","label":"PPP5C"},{"id":"CTNNB1","group":"Protein","label":"CTNNB1"},{"id":"KRAS","group":"Protein","label":"KRAS"}]}'
- ></drugst-one>
-
- <!-- <drugst-one id="netexp1"-->
- <!-- pluginId="2"-->
- <!-- groups='{"nodeGroups":{"patient":{"type":"patient","color":"#000000","font":{"color":"#000000"},"groupName":"Patient","shape":"image","image":"https://static.thenounproject.com/png/22780-200.png"},"condition":{"type":"condition","color":"#000000","font":{"color":"#000000"},"groupName":"Condition","shape":"text"},"important":{"type":"gene","color":"#ff881f","font":{"color":"#000000"},"groupName":"Important Gene","shape":"star"},"gene":{"type":"gene","color":"#ff084e","font":{"color":"#000000"},"groupName":"Gene","shape":"diamond"},"foundDrug":{"type":"drug","color":"#F12590","font":{"color":"#000000"},"groupName":"Drug","shape":"diamond"}},"edgeGroups":{"genotype":{"color":"#000000","groupName":"Relevant Gene"},"has-condition":{"color":"#000000","groupName":"Has Condition","dashes":[2,2]},"default":{"color":"#000000","groupName":"default edge"},"ggi":{"color":"#000000","groupName":"Interaction","dashes":[3,2]}}}'-->
- <!-- config='{"identifier":"entrez","title":"Breast cancer example network","nodeShadow":true,"edgeShadow":false,"autofillEdges":true,"interactionProteinProtein":"STRING","licensedDatasets":true,"selfReferences":false,"nodeGroups":{"patient":{"type":"patient","color":"#000000","font":{"color":"#000000"},"groupName":"Patient","shape":"image","image":"https://static.thenounproject.com/png/22780-200.png"},"condition":{"type":"condition","color":"#000000","font":{"color":"#000000"},"groupName":"Condition","shape":"text"},"important":{"type":"gene","color":"#ff881f","font":{"color":"#000000"},"groupName":"Important Gene","shape":"star"},"gene":{"type":"gene","color":"#ff084e","font":{"color":"#000000"},"groupName":"Gene","shape":"diamond"},"foundDrug":{"type":"drug","color":"#F12590","font":{"color":"#000000"},"groupName":"Drug","shape":"diamond"}}}'-->
- <!-- network='{"nodes":[{"id":"7040","group":"gene","label":"7040"},{"id":"7132","group":"gene","label":"7132"},{"id":"51164","group":"gene","label":"51164"},{"id":"6338","group":"gene","label":"6338"},{"id":"6337","group":"gene","label":"6337"},{"id":"6340","group":"gene","label":"6340"},{"id":"2212","group":"gene","label":"2212"},{"id":"2022","group":"gene","label":"2022"},{"id":"6804","group":"gene","label":"6804"},{"id":"1080","group":"gene","label":"1080"},{"id":"22802","group":"gene","label":"22802"}],"edges":[{"from":"BRCA1","to":"BRCA2","group":"ggi"},{"from":"ATM","to":"BARD1","group":"ggi"},{"from":"BRCA1","to":"CHEK2","group":"ggi"},{"from":"RAD51C","to":"RAD51D","group":"ggi"},{"from":"STK11","to":"TP53","group":"ggi"},{"from":"TP53","to":"PALB2","group":"ggi"},{"from":"TP53","to":"RAD51D","group":"ggi"},{"from":"TP53","to":"NF1","group":"ggi"},{"from":"TP53","to":"BRCA1","group":"ggi"},{"from":"TP53","to":"BRCA2","group":"ggi"},{"from":"PTEN","to":"BRCA1","group":"ggi"},{"from":"PTEN","to":"BRCA2","group":"ggi"},{"from":"TP53","to":"PTEN","group":"ggi"},{"from":"ATM","to":"PTEN","group":"ggi"},{"from":"CDH1","to":"RAD51D","group":"ggi"},{"from":"CDH1","to":"PALB2","group":"ggi"},{"from":"NBN","to":"BRIP1","group":"ggi"},{"from":"BRIP1","to":"PTEN","group":"ggi"},{"from":"patient-1","to":"BRCA1","group":"genotype"},{"from":"patient-1","to":"TP53","group":"genotype"},{"from":"patient-1","to":"BRCA2","group":"genotype"},{"from":"patient-1","to":"PTEN","group":"genotype"},{"from":"patient-2","to":"TP53","group":"genotype"},{"from":"patient-2","to":"NF1","group":"genotype"},{"from":"patient-2","to":"BARD1","group":"genotype"},{"from":"patient-3","to":"TP53","group":"genotype"},{"from":"patient-3","to":"PTEN","group":"genotype"},{"from":"patient-3","to":"NBN","group":"genotype"},{"from":"patient-1","to":"subtype-1","group":"has-condition"},{"from":"patient-2","to":"subtype-1","group":"has-condition"},{"from":"patient-3","to":"subtype-2","group":"has-condition"}]}'>-->
- <!--</drugst-one>-->
+<!-- <drugst-one id="tatata"-->
+<!-- groups='{"edgeGroups":{"default":{"color":"#000000","groupName":"default edge"}}, "nodeGroups" : { "selectedNode": { "borderWidth": 3,"borderWidthSelected": 4,"color": { "border": "#C80BFD","highlight": {"border": "#C80BFD"}},"font": { "color": "#0000000","size": 14 }},"Protein":{"shape":"circle","groupName":"Protein","type":"Protein","color":"#C99AFFFF","font":{"color":"#FFFFFF"}}}}'-->
+<!-- config='{"identifier":"symbol","title":"ROBUST output network", "taskDrugName": "Drug Search", "showLegendNodes": true, "showLegendEdges": true, "showSidebar": "left", "showOverview": true, "legendPos": "left", "legendClass": "legend", "showQuery": true, "showItemSelector": true,"showSimpleAnalysis": false,"showAdvAnalysis": true,"showSelection": true,"showTasks": true,"showNetworkMenu": "right","showLegend": true,"showNetworkMenuButtonExpression": true, "showNetworkMenuButtonScreenshot": true,"showNetworkMenuButtonExportGraphml": true,"showNetworkMenuButtonAdjacentDrugs": true,"showNetworkMenuButtonCenter": true,"showConnectGenes": false,"networkMenuButtonAdjacentDrugsLabel": "Drugs","showNetworkMenuButtonAdjacentDisordersProteins": true,"networkMenuButtonAdjacentDisordersProteinsLabel": "Disorders (protein)","showNetworkMenuButtonAdjacentDisordersDrugs": true,"networkMenuButtonAdjacentDisordersDrugsLabel": "Disorders (drug)","showNetworkMenuButtonAnimation": true,"networkMenuButtonAnimationLabel": "Animation", "autofillEdges": true, "physicsOn": false,"useNedrexLicenced": true,"selfReferences": false, "interactionDrugProtein": "NeDRex", "indicationDrugDisorder": "NeDRex","nodeShadow": true,"edgeShadow": false, "algorithms": {"drug": ["trustrank", "closeness", "degree", "proximity"], "drug-target": ["trustrank", "multisteiner", "keypathwayminer", "degree", "closeness", "betweenness"]}, "associatedProteinDisorder": "NeDRex", "expandNetworkMenu": true}'-->
+<!-- network='{"nodes": [{"id":"PSEN1","group":"Protein","label":"PSEN1"},{"id":"PSEN2","group":"Protein","label":"PSEN2"},{"id":"APP","group":"Protein","label":"APP"},{"id":"APOE","group":"Protein","label":"APOE"},{"id":"RNF32","group":"Protein","label":"RNF32"},{"id":"STX5","group":"Protein","label":"STX5"},{"id":"TRAF3IP1","group":"Protein","label":"TRAF3IP1"},{"id":"PHB1","group":"Protein","label":"PHB1"},{"id":"MAPT","group":"Protein","label":"MAPT"},{"id":"ESR1","group":"Protein","label":"ESR1"},{"id":"IRF3","group":"Protein","label":"IRF3"},{"id":"DYNC1H1","group":"Protein","label":"DYNC1H1"},{"id":"CUL3","group":"Protein","label":"CUL3"},{"id":"HMGB1","group":"Protein","label":"HMGB1"},{"id":"DNAJC7","group":"Protein","label":"DNAJC7"},{"id":"NEFM","group":"Protein","label":"NEFM"},{"id":"DISC1","group":"Protein","label":"DISC1"},{"id":"PPP5C","group":"Protein","label":"PPP5C"},{"id":"CTNNB1","group":"Protein","label":"CTNNB1"},{"id":"KRAS","group":"Protein","label":"KRAS"}]}'-->
+<!-- ></drugst-one>-->
+
+ <drugst-one id="netexp1"
+ pluginId="2"
+ groups='{"nodeGroups":{"patient":{"type":"patient","color":"#000000","font":{"color":"#000000"},"groupName":"Patient","shape":"image","image":"https://static.thenounproject.com/png/22780-200.png"},"condition":{"type":"condition","color":"#000000","font":{"color":"#000000"},"groupName":"Condition","shape":"text"},"important":{"type":"gene","color":"#ff881f","font":{"color":"#000000"},"groupName":"Important Gene","shape":"star"},"gene":{"type":"gene","color":"#ff084e","font":{"color":"#000000"},"groupName":"Gene","shape":"diamond"},"foundDrug":{"type":"drug","color":"#F12590","font":{"color":"#000000"},"groupName":"Drug","shape":"diamond"}},"edgeGroups":{"genotype":{"color":"#000000","groupName":"Relevant Gene"},"has-condition":{"color":"#000000","groupName":"Has Condition","dashes":[2,2]},"default":{"color":"#000000","groupName":"default edge"},"ggi":{"color":"#000000","groupName":"Interaction","dashes":[3,2]}}}'
+ config='{"identifier":"entrez","title":"Breast cancer example network","nodeShadow":true,"edgeShadow":false,"autofillEdges":true,"interactionProteinProtein":"STRING","licensedDatasets":true,"selfReferences":false,"nodeGroups":{"patient":{"type":"patient","color":"#000000","font":{"color":"#000000"},"groupName":"Patient","shape":"image","image":"https://static.thenounproject.com/png/22780-200.png"},"condition":{"type":"condition","color":"#000000","font":{"color":"#000000"},"groupName":"Condition","shape":"text"},"important":{"type":"gene","color":"#ff881f","font":{"color":"#000000"},"groupName":"Important Gene","shape":"star"},"gene":{"type":"gene","color":"#ff084e","font":{"color":"#000000"},"groupName":"Gene","shape":"diamond"},"foundDrug":{"type":"drug","color":"#F12590","font":{"color":"#000000"},"groupName":"Drug","shape":"diamond"}}}'
+ network='{"nodes":[{"id":"7040","group":"gene","label":"7040"},{"id":"7132","group":"gene","label":"7132"},{"id":"51164","group":"gene","label":"51164"},{"id":"6338","group":"gene","label":"6338"},{"id":"6337","group":"gene","label":"6337"},{"id":"6340","group":"gene","label":"6340"},{"id":"2212","group":"gene","label":"2212"},{"id":"2022","group":"gene","label":"2022"},{"id":"6804","group":"gene","label":"6804"},{"id":"1080","group":"gene","label":"1080"},{"id":"22802","group":"gene","label":"22802"}],"edges":[{"from":"BRCA1","to":"BRCA2","group":"ggi"},{"from":"ATM","to":"BARD1","group":"ggi"},{"from":"BRCA1","to":"CHEK2","group":"ggi"},{"from":"RAD51C","to":"RAD51D","group":"ggi"},{"from":"STK11","to":"TP53","group":"ggi"},{"from":"TP53","to":"PALB2","group":"ggi"},{"from":"TP53","to":"RAD51D","group":"ggi"},{"from":"TP53","to":"NF1","group":"ggi"},{"from":"TP53","to":"BRCA1","group":"ggi"},{"from":"TP53","to":"BRCA2","group":"ggi"},{"from":"PTEN","to":"BRCA1","group":"ggi"},{"from":"PTEN","to":"BRCA2","group":"ggi"},{"from":"TP53","to":"PTEN","group":"ggi"},{"from":"ATM","to":"PTEN","group":"ggi"},{"from":"CDH1","to":"RAD51D","group":"ggi"},{"from":"CDH1","to":"PALB2","group":"ggi"},{"from":"NBN","to":"BRIP1","group":"ggi"},{"from":"BRIP1","to":"PTEN","group":"ggi"},{"from":"patient-1","to":"BRCA1","group":"genotype"},{"from":"patient-1","to":"TP53","group":"genotype"},{"from":"patient-1","to":"BRCA2","group":"genotype"},{"from":"patient-1","to":"PTEN","group":"genotype"},{"from":"patient-2","to":"TP53","group":"genotype"},{"from":"patient-2","to":"NF1","group":"genotype"},{"from":"patient-2","to":"BARD1","group":"genotype"},{"from":"patient-3","to":"TP53","group":"genotype"},{"from":"patient-3","to":"PTEN","group":"genotype"},{"from":"patient-3","to":"NBN","group":"genotype"},{"from":"patient-1","to":"subtype-1","group":"has-condition"},{"from":"patient-2","to":"subtype-1","group":"has-condition"},{"from":"patient-3","to":"subtype-2","group":"has-condition"}]}'>
+ </drugst-one>
<!--ENSEMBL test-->
diff --git a/src/stylesheets/bulma.scss b/src/stylesheets/bulma.scss
index b807f7db..38a08d7a 100644
--- a/src/stylesheets/bulma.scss
+++ b/src/stylesheets/bulma.scss
@@ -11,7 +11,7 @@
font-family: var(--drgstn-font-family);
p {
- margin-bottom: .4rem !important;
+ margin-bottom: .4rem;
}
.card-content.explorer-network-view-settings {
diff --git a/src/stylesheets/styles.scss b/src/stylesheets/styles.scss
index 0b0a7ba5..ef37a2d9 100644
--- a/src/stylesheets/styles.scss
+++ b/src/stylesheets/styles.scss
@@ -137,10 +137,15 @@
}
div.card-content.overflow {
- overflow: auto;
+ overflow-y: auto;
max-height: 350px;
}
+ tbody.overflow {
+ overflow-y: auto;
+ max-height: $sidebar-selection-table-height;
+ }
+
div.drugstone.network {
height: 100%;
position: relative;
diff --git a/src/stylesheets/variables.scss b/src/stylesheets/variables.scss
index ea332a83..f00533ce 100644
--- a/src/stylesheets/variables.scss
+++ b/src/stylesheets/variables.scss
@@ -56,7 +56,7 @@ $height: 100%;
$sidebar-width: 25%;
$sidebar-min-width: 240px;
-
+$sidebar-selection-table-height: 300px;
// settings for different screen sizes
$b-text-small-font-size: 14px;
$b-text-smaller-font-size: 12px;
--
GitLab