diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 33c76c8ea181cb8a4dcb85ed8a3f677a8bda4711..4b2eae93deb1e246452d3aeabb970e203b5ab63f 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -40,7 +40,7 @@ build:
- dist
script:
- npm install
- - npm run build --max_old_space_size=4096 --prod
+ - npm run build --max_old_space_size=8192 --prod
dependencies:
- check:lint
# - check:test
diff --git a/src/app/app-routing.module.ts b/src/app/app-routing.module.ts
index a5fcbde53857f4c34ad6fe0238433e3e3349a88b..99d882e62da958fa0a3a54a9ae11287973a655a3 100644
--- a/src/app/app-routing.module.ts
+++ b/src/app/app-routing.module.ts
@@ -1,6 +1,7 @@
import { NgModule } from '@angular/core';
import { RouterModule, Routes } from '@angular/router';
import { StandaloneComponent } from "./pages/standalone/standalone/standalone.component";
+import { CallLandingComponent } from "./pages/call-landing/call-landing.component";
import { PagesComponent } from "./pages/pages.component";
const routes: Routes = [
@@ -8,6 +9,8 @@ const routes: Routes = [
{ path: "idea", component: PagesComponent },
{ path: "standalone", component: StandaloneComponent },
{ path: "playground", component: PagesComponent },
+ { path: "cite", component: PagesComponent },
+ { path: "call", component: PagesComponent },
{
path: "doc", component: PagesComponent, children: [
{ path: 'home', component: PagesComponent },
diff --git a/src/app/app.component.scss b/src/app/app.component.scss
index ae5c963d0ace2626bb61a46f0b36e2ed63667292..39adf609b818e1f6fbda3f05ae2bd4505ca2e6e7 100644
--- a/src/app/app.component.scss
+++ b/src/app/app.component.scss
@@ -3,4 +3,4 @@
.main-container {
min-height: calc(100vh - #{$footer-height + $navbar-height});
height: calc(100% - #{$footer-height + $navbar-height});
-}
\ No newline at end of file
+}
diff --git a/src/app/app.module.ts b/src/app/app.module.ts
index 3b01556c6f4a59b29212458686e708b8c00a0800..c12826c6561b04932f6dae0527bf450f1a584428 100644
--- a/src/app/app.module.ts
+++ b/src/app/app.module.ts
@@ -126,6 +126,10 @@ import { PythonPackageComponent } from './pages/doc/content/other/python-package
import { FromScratchComponent } from './pages/doc/content/start/from-scratch/from-scratch.component';
import { PrivacyPolicyComponent } from './pages/doc/content/other/privacy-policy/privacy-policy.component';
import { ExamplesComponent } from './components/playground/examples/examples.component';
+import { CallLandingComponent } from './pages/call-landing/call-landing.component';
+import { ToolsBannerComponent } from './components/other/tools-banner/tools-banner.component';
+import { ToolPanelComponent } from './components/other/tools-banner/tool-panel/tool-panel.component';
+import { CiteComponent } from './pages/cite/cite.component';
@NgModule({
@@ -196,6 +200,10 @@ import { ExamplesComponent } from './components/playground/examples/examples.com
FromScratchComponent,
PrivacyPolicyComponent,
ExamplesComponent,
+ CallLandingComponent,
+ CiteComponent,
+ ToolsBannerComponent,
+ ToolPanelComponent,
],
imports: [
BrowserModule,
diff --git a/src/app/components/footer/footer.component.html b/src/app/components/footer/footer.component.html
index 86596bab8e1de1ad26e1e169d2c3b03f2f1b8c1f..027b11e3f40fd2440f28037ac8ec08b5c6517ecc 100644
--- a/src/app/components/footer/footer.component.html
+++ b/src/app/components/footer/footer.component.html
@@ -28,11 +28,11 @@
<ul class="nav flex-column">
<li class="nav-item mb-2"><a href="https://www.cosy.bio/contact" target="_blank" class="nav-link p-0 text-muted">Impressum</a></li>
<li class="nav-item mb-2"><a href="https://twitter.com/cosybio_uhh?lang=de" target="_blank" class="nav-link p-0 text-muted">Twitter</a></li>
- <li class="nav-item mb-2"><a href="/doc#contact_us" target="_blank" class="nav-link p-0 text-muted">Contact us</a></li>
+ <!-- <li class="nav-item mb-2"><a href="/doc#contact_us" target="_blank" class="nav-link p-0 text-muted">Contact us</a></li> -->
+ <li class="nav-item mb-2"><a class="nav-link p-0 text-muted" href= "/cite">Cite us</a></li>
+ <li class="nav-item mb-2"><a class="nav-link p-0 text-muted" href= "mailto:contact@drugst.one">Contact us</a></li>
</ul>
</div>
</footer>
</div>
-
-
diff --git a/src/app/components/header/header.component.ts b/src/app/components/header/header.component.ts
index a34e4bf583b68051812ecb851d7648252a3483fc..ec868e598a6cd5fc96da2c1e7ee2be8ecb0d3c38 100644
--- a/src/app/components/header/header.component.ts
+++ b/src/app/components/header/header.component.ts
@@ -21,14 +21,16 @@ export class HeaderComponent implements OnInit {
this.tabsModel = [
{label: 'HOME', icon: 'pi pi-fw pi-home', routerLink: 'home', command: () => this.tabChange(0)},
{label: 'IDEA', icon: 'pi pi-fw pi-question-circle', routerLink: 'idea', command: () => this.tabChange(1)},
- {label: 'STANDALONE', icon: 'pi pi-fw pi-send', routerLink: 'standalone', command: () => this.tabChange(2)},
+ { label: 'STANDALONE', icon: 'pi pi-fw pi-send', routerLink: 'standalone', command: () => this.tabChange(2) },
{
label: 'PLAYGROUND',
icon: 'pi pi-fw pi-sliders-v',
routerLink: 'playground',
command: () => this.tabChange(3)
},
- {label: 'DOCUMENTATION', icon: 'pi pi-fw pi-book', routerLink: 'doc', command: () => this.tabChange(4)}]
+ { label: 'DOCUMENTATION', icon: 'pi pi-fw pi-book', routerLink: 'doc', command: () => this.tabChange(4) },
+ { label: 'CITE', icon: 'pi pi-fw pi-pencil', routerLink: 'cite', command: () => this.tabChange(5)},
+ { label: 'COLLABORATION', icon: 'pi pi-fw pi-phone', routerLink: 'call', command: () => this.tabChange(6) }]
this.activeTab = this.tabsModel[0];
}
diff --git a/src/app/components/other/tools-banner/tool-panel/tool-panel.component.html b/src/app/components/other/tools-banner/tool-panel/tool-panel.component.html
new file mode 100644
index 0000000000000000000000000000000000000000..3e37ef4a6cd5d5b3d01d6efa66646240b03a2905
--- /dev/null
+++ b/src/app/components/other/tools-banner/tool-panel/tool-panel.component.html
@@ -0,0 +1,9 @@
+<p-card class="d-flex">
+ <div class="tool-banner">
+ <div class=" flex-wrap tool-panel">
+ <a *ngIf="!icon" [href]="link" class="tool-link" target="_blank"
+ [style]="{'font-size': font_size ? font_size : '25pt'}">{{label}}</a>
+ <a *ngIf="icon" [href]="link" target="_blank"><img [src]="icon" [width]="width ? width : 200"></a>
+ </div>
+ </div>
+</p-card>
diff --git a/src/app/components/other/tools-banner/tool-panel/tool-panel.component.scss b/src/app/components/other/tools-banner/tool-panel/tool-panel.component.scss
new file mode 100644
index 0000000000000000000000000000000000000000..f3a8613246c53ab0ec5931d319b3b4dc6a7490d1
--- /dev/null
+++ b/src/app/components/other/tools-banner/tool-panel/tool-panel.component.scss
@@ -0,0 +1,18 @@
+.tool-banner {
+ width: 200px;
+ height: 70px;
+ cursor: pointer;
+}
+
+.tool-panel {
+ width: 100%;
+ height: 100%;
+ display: flex;
+ margin: auto;
+ justify-content: center;
+ align-content: center;
+}
+
+.tool-link {
+ text-decoration: none;
+}
diff --git a/src/app/components/other/tools-banner/tool-panel/tool-panel.component.spec.ts b/src/app/components/other/tools-banner/tool-panel/tool-panel.component.spec.ts
new file mode 100644
index 0000000000000000000000000000000000000000..21a0ccf7e676379ed782933cef9757b6dc52afb2
--- /dev/null
+++ b/src/app/components/other/tools-banner/tool-panel/tool-panel.component.spec.ts
@@ -0,0 +1,25 @@
+import { ComponentFixture, TestBed } from '@angular/core/testing';
+
+import { ToolPanelComponent } from './tool-panel.component';
+
+describe('ToolPanelComponent', () => {
+ let component: ToolPanelComponent;
+ let fixture: ComponentFixture<ToolPanelComponent>;
+
+ beforeEach(async () => {
+ await TestBed.configureTestingModule({
+ declarations: [ ToolPanelComponent ]
+ })
+ .compileComponents();
+ });
+
+ beforeEach(() => {
+ fixture = TestBed.createComponent(ToolPanelComponent);
+ component = fixture.componentInstance;
+ fixture.detectChanges();
+ });
+
+ it('should create', () => {
+ expect(component).toBeTruthy();
+ });
+});
diff --git a/src/app/components/other/tools-banner/tool-panel/tool-panel.component.ts b/src/app/components/other/tools-banner/tool-panel/tool-panel.component.ts
new file mode 100644
index 0000000000000000000000000000000000000000..a17b06f43c05ce460adc35cef26215d815b20123
--- /dev/null
+++ b/src/app/components/other/tools-banner/tool-panel/tool-panel.component.ts
@@ -0,0 +1,22 @@
+import {Component, Input, OnInit} from '@angular/core';
+
+@Component({
+ selector: 'app-tool-panel',
+ templateUrl: './tool-panel.component.html',
+ styleUrls: ['./tool-panel.component.scss']
+})
+export class ToolPanelComponent implements OnInit {
+
+ @Input() label: string = "";
+ @Input() link: string = "";
+ @Input() icon: string | undefined = undefined
+ @Input() font_size: string |undefined= undefined
+ @Input() width: number |undefined = undefined
+
+ constructor() { }
+
+ ngOnInit(): void {
+ }
+
+ protected readonly undefined = undefined;
+}
diff --git a/src/app/components/other/tools-banner/tools-banner.component.html b/src/app/components/other/tools-banner/tools-banner.component.html
new file mode 100644
index 0000000000000000000000000000000000000000..c662325c8ceec3e7a778756a85db80a4151fa765
--- /dev/null
+++ b/src/app/components/other/tools-banner/tools-banner.component.html
@@ -0,0 +1,3 @@
+<div class="row align-items-start text-center">
+ <app-tool-panel class="col mt-3" *ngFor="let tool of tool_list" [label]="tool.label" [icon]="tool.icon" [link]="tool.link" [font_size]="tool.font_size" [width]="tool.width"></app-tool-panel>
+</div>
diff --git a/src/app/components/other/tools-banner/tools-banner.component.scss b/src/app/components/other/tools-banner/tools-banner.component.scss
new file mode 100644
index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391
diff --git a/src/app/components/other/tools-banner/tools-banner.component.spec.ts b/src/app/components/other/tools-banner/tools-banner.component.spec.ts
new file mode 100644
index 0000000000000000000000000000000000000000..4a9280046a783889401f50d36cc037a991b7c269
--- /dev/null
+++ b/src/app/components/other/tools-banner/tools-banner.component.spec.ts
@@ -0,0 +1,25 @@
+import { ComponentFixture, TestBed } from '@angular/core/testing';
+
+import { ToolsBannerComponent } from './tools-banner.component';
+
+describe('ToolsBannerComponent', () => {
+ let component: ToolsBannerComponent;
+ let fixture: ComponentFixture<ToolsBannerComponent>;
+
+ beforeEach(async () => {
+ await TestBed.configureTestingModule({
+ declarations: [ ToolsBannerComponent ]
+ })
+ .compileComponents();
+ });
+
+ beforeEach(() => {
+ fixture = TestBed.createComponent(ToolsBannerComponent);
+ component = fixture.componentInstance;
+ fixture.detectChanges();
+ });
+
+ it('should create', () => {
+ expect(component).toBeTruthy();
+ });
+});
diff --git a/src/app/components/other/tools-banner/tools-banner.component.ts b/src/app/components/other/tools-banner/tools-banner.component.ts
new file mode 100644
index 0000000000000000000000000000000000000000..c72ad4c4d6ffd41001883ca987de1ceb8e8afb6f
--- /dev/null
+++ b/src/app/components/other/tools-banner/tools-banner.component.ts
@@ -0,0 +1,42 @@
+import {Component, Input, OnInit} from '@angular/core';
+
+@Component({
+ selector: 'app-tools-banner',
+ templateUrl: './tools-banner.component.html',
+ styleUrls: ['./tools-banner.component.scss']
+})
+export class ToolsBannerComponent implements OnInit {
+
+ constructor() {
+ }
+
+ ngOnInit(): void {
+ }
+
+ public tool_list = [
+ {label: "BiCoN", link: "https://exbio.wzw.tum.de/bicon/"},
+ {label: "BioCypher", link: "https://biocypher.org/", icon:"assets/tools/biocypher.png"},
+ {label: "DOMINO", link: "http://domino.cs.tau.ac.il/", icon: "assets/tools/domino.png"},
+ {label: "G-Browser", link: "https://exbio.wzw.tum.de/genome-browser/"},
+ {label: "GraphFusion", link: "https://github.com/CarlosJesusGH/GraphFusion"},
+ {label: "GraphSimViz", link: "https://graphsimviz.net/", icon: "assets/tools/graphsimviz.png"},
+ {label: "HitSeekR", link: "https://exbio.wzw.tum.de/hitseekr/", icon: "assets/tools/hitseekr.png"},
+ {label: "Interactive Enrichment Analysis", link: "https://github.com/gladstone-institutes/Interactive-Enrichment-Analysis/", font_size: "20pt"},
+ {label: "mirDIP", link: "https://ophid.utoronto.ca/mirDIP/"},
+ {label: "NAViGaTOR", link: "https://ophid.utoronto.ca/navigator/", icon: "assets/tools/navigator.png"},
+ {label: "NDEx IQuery", link: "https://www.ndexbio.org/iquery/", icon: "assets/tools/iquery.png"},
+ {label: "Epistasis Disease Atlas", link: "https://epistasis-disease-atlas.com", font_size: "20pt"},
+ {label: "NDEx", link: "https://ndexbio.org/#/home", icon: "assets/tools/ndex.png"},
+ {label: "NeEDL - R Shiny App", link: "https://hub.docker.com/r/bigdatainbiomedicine/needl", font_size: "20pt"},
+ {label: "openPIP", link: "https://github.com/BaderLab/openPIP", icon: "assets/tools/openpip.png"},
+ {label: "pathDIP", link: "https://ophid.utoronto.ca/pathDIP", icon: "assets/tools/pathdip.jpg"},
+ {label: "Pathway Figure OCR ", link: "https://pfocr.wikipathways.org", icon: "assets/tools/pfocr.png", width: 100},
+ {label: "ProHarMeD", link: "https://proharmed.zbh.uni-hamburg.de/", icon: "assets/tools/proharmed.png"},
+ {label: "ROBUST-Web", link: "https://robust-web.net/"},
+ {label: "SCANet", link: "https://pypi.org/project/scanet/"},
+ {label: "Seed Connector Algorithm", link: "https://github.com/bwh784/SCA", font_size: "20pt"},
+ {label: "UnPaSt", link: "https://unpast.zbh.uni-hamburg.de", icon: "assets/tools/unpast.png", width: 120},
+ {label: "WikiPathways", link: "https://wikipathways.org", icon: "assets/tools/wikipathways.svg"},
+
+ ]
+}
diff --git a/src/app/components/playground/sidebar/sidebar.component.html b/src/app/components/playground/sidebar/sidebar.component.html
index 612da2dcf62a8aa59d4714e53e138558b2fd3116..1d19b48917af2d86eb568aa9e52e803220e9bc20 100644
--- a/src/app/components/playground/sidebar/sidebar.component.html
+++ b/src/app/components/playground/sidebar/sidebar.component.html
@@ -62,7 +62,7 @@
[items]="filterDatasets(dataLists.drugProtInterList, getConfig('licensedDatasets'))"
[model]="getConfigOrDefault('interactionDrugProtein', 'NeDRex')"
tooltip="Select the dataset of drug-protein information that is later used in functions like 'Drug Search' and 'Quick Drug Search'."
- (onChange)="changeConfig('interactionProteinProtein', $event)"
+ (onChange)="changeConfig('interactionDrugProtein', $event)"
></app-dropdown>
<app-dropdown
label="Protein-Disease Association DB"
diff --git a/src/app/pages/call-landing/call-landing.component.html b/src/app/pages/call-landing/call-landing.component.html
new file mode 100644
index 0000000000000000000000000000000000000000..d2e804a58db704176e5d152db9cd74d553e9d4c0
--- /dev/null
+++ b/src/app/pages/call-landing/call-landing.component.html
@@ -0,0 +1,50 @@
+<div
+ class="container px-4 px-lg-5 align-items-center justify-content-center text-center"
+>
+ <div class="col-lg-12 align-self-end">
+ <h1 class="display-5">Call for Collaboration</h1>
+ </div>
+ <div class="row justify-content-center align-items-center mb-5">
+ <div class="col-md-10 text-center">
+ <img
+ class="img-fluid call-image"
+ src="assets/Drugstone_preprint_figure1.png"
+ />
+ </div>
+ <div class="col-md-10 align-self-baseline">
+ <p class="text-white-75 mb-5 blockquote">
+ Drugst.One is a plug-and-play solution for everyone seeking a
+ feature-rich network explorer that bridges the gap between sets of genes
+ or proteins and drug-repurposing candidates.It is capable of instantly
+ enriching biomedical input information. With just one click, users have
+ the option to visualize tissue-specific expression values or link
+ disease-specific protein-protein interactions to disease associations
+ and closely related drugs. The plugin is designed to seamlessly fit into
+ any web application with just three lines of code.
+ <br />
+ For more information, check out our preprint: <a target="_blank" href="
+https://doi.org/10.48550/arXiv.2305.15453">
+https://doi.org/10.48550/arXiv.2305.15453</a>
+ </p>
+ <p class="text-white-75 mb-5 blockquote">
+ We are looking for collaborators to join the Drugst.One initiative. If
+ you want to join the project and integrate Drugst.One to your tool,
+ either as plugin, link-out, or through the python package, and provide
+ feedback or help us develop it, we are looking forward to hearing from
+ you!
+ </p>
+ <a
+ class="btn btn-primary btn-xl"
+ href="https://docs.google.com/forms/d/e/1FAIpQLSfdIXBOW3bgjEmvtcp66p5qnKYPLxgOOm8ZPXG4tVr50SdmIg/viewform?usp=sf_link"
+ target="_blank"
+ >I am interested</a
+ >
+ </div>
+ </div>
+ <p-divider></p-divider>
+ <div >
+ <h1 class="display-5 d-flex justify-content-center">
+ Existing Collaborations</h1>
+ <app-tools-banner></app-tools-banner>
+ </div>
+</div>
diff --git a/src/app/pages/call-landing/call-landing.component.scss b/src/app/pages/call-landing/call-landing.component.scss
new file mode 100644
index 0000000000000000000000000000000000000000..bc29fb5bc58e5417dd77177fcd0596172695f0b4
--- /dev/null
+++ b/src/app/pages/call-landing/call-landing.component.scss
@@ -0,0 +1,3 @@
+.call-image {
+ width: 60%;
+}
\ No newline at end of file
diff --git a/src/app/pages/call-landing/call-landing.component.spec.ts b/src/app/pages/call-landing/call-landing.component.spec.ts
new file mode 100644
index 0000000000000000000000000000000000000000..2a8a6ef7f04e1f0f1dc7c1c82b7fcc5303426983
--- /dev/null
+++ b/src/app/pages/call-landing/call-landing.component.spec.ts
@@ -0,0 +1,25 @@
+import { ComponentFixture, TestBed } from '@angular/core/testing';
+
+import { CallLandingComponent } from './call-landing.component';
+
+describe('CallLandingComponent', () => {
+ let component: CallLandingComponent;
+ let fixture: ComponentFixture<CallLandingComponent>;
+
+ beforeEach(async () => {
+ await TestBed.configureTestingModule({
+ declarations: [ CallLandingComponent ]
+ })
+ .compileComponents();
+ });
+
+ beforeEach(() => {
+ fixture = TestBed.createComponent(CallLandingComponent);
+ component = fixture.componentInstance;
+ fixture.detectChanges();
+ });
+
+ it('should create', () => {
+ expect(component).toBeTruthy();
+ });
+});
diff --git a/src/app/pages/call-landing/call-landing.component.ts b/src/app/pages/call-landing/call-landing.component.ts
new file mode 100644
index 0000000000000000000000000000000000000000..6281179a1a6680e0b8e503895af197597ce97716
--- /dev/null
+++ b/src/app/pages/call-landing/call-landing.component.ts
@@ -0,0 +1,15 @@
+import { Component, OnInit } from '@angular/core';
+
+@Component({
+ selector: 'app-call-landing',
+ templateUrl: './call-landing.component.html',
+ styleUrls: ['./call-landing.component.scss']
+})
+export class CallLandingComponent implements OnInit {
+
+ constructor() { }
+
+ ngOnInit(): void {
+ }
+
+}
diff --git a/src/app/pages/cite/cite.component.html b/src/app/pages/cite/cite.component.html
new file mode 100644
index 0000000000000000000000000000000000000000..32d770e4bd98fd14dcd49f4400edab77fad43bfd
--- /dev/null
+++ b/src/app/pages/cite/cite.component.html
@@ -0,0 +1,29 @@
+<div
+ class="container px-4 px-lg-5 align-items-center justify-content-center text-center"
+>
+
+ <div class="col-lg-12">
+ <h1 class="display-5">How to cite</h1>
+ </div>
+
+
+ <div class="row justify-content-start align-items-start text-start">
+
+ <p>If you use Drugst.One in your work, please cite as follows:</p>
+ <div class="mb-3">
+ <label for="plain" class="form-label">Plain</label>
+ <pre id="plain"><textarea class="form-control" rows="3" disabled> {{plain}} </textarea></pre>
+ </div>
+ <div class="mb-3">
+ <label for="bibtex" class="form-label">BibTeX</label>
+ <pre id="bibtex"><textarea class="form-control" rows="14" disabled> {{bibtex}} </textarea></pre>
+ </div>
+ <div class="mb-3">
+ Preprint URL: <a href="
+https://doi.org/10.48550/arXiv.2305.15453" target="_blank">
+ https://doi.org/10.48550/arXiv.2305.15453 </a>
+ </div>
+ </div>
+
+</div>
+
diff --git a/src/app/pages/cite/cite.component.scss b/src/app/pages/cite/cite.component.scss
new file mode 100644
index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391
diff --git a/src/app/pages/cite/cite.component.spec.ts b/src/app/pages/cite/cite.component.spec.ts
new file mode 100644
index 0000000000000000000000000000000000000000..1a7589ab472f54221e8ec5ef7113b0785284942f
--- /dev/null
+++ b/src/app/pages/cite/cite.component.spec.ts
@@ -0,0 +1,25 @@
+import { ComponentFixture, TestBed } from '@angular/core/testing';
+
+import { CiteComponent } from './cite.component';
+
+describe('CiteComponent', () => {
+ let component: CiteComponent;
+ let fixture: ComponentFixture<CiteComponent>;
+
+ beforeEach(async () => {
+ await TestBed.configureTestingModule({
+ declarations: [ CiteComponent ]
+ })
+ .compileComponents();
+ });
+
+ beforeEach(() => {
+ fixture = TestBed.createComponent(CiteComponent);
+ component = fixture.componentInstance;
+ fixture.detectChanges();
+ });
+
+ it('should create', () => {
+ expect(component).toBeTruthy();
+ });
+});
diff --git a/src/app/pages/cite/cite.component.ts b/src/app/pages/cite/cite.component.ts
new file mode 100644
index 0000000000000000000000000000000000000000..c135209a17526c71d8268a9b4d69843750ea8ecb
--- /dev/null
+++ b/src/app/pages/cite/cite.component.ts
@@ -0,0 +1,61 @@
+import { Component, OnInit } from '@angular/core';
+
+@Component({
+ selector: 'app-cite',
+ templateUrl: './cite.component.html',
+ styleUrls: ['./cite.component.scss']
+})
+export class CiteComponent implements OnInit {
+
+ constructor() { }
+
+ public plain = `Maier A, Hartung M, Baumbach J, et al. (2023) Drugst.One -- A plug-and-play solution for online systems medicine and network-based drug repurposing (Version 1). arXiv. https://doi.org/10.48550/ARXIV.2305.15453`
+
+ public bibtex = ` @ARTICLE{Maier2023-ag,
+ title = "{Drugst.One} -- A plug-and-play solution for online systems
+ medicine and network-based drug repurposing",
+ author = "Maier, Andreas and Hartung, Michael and Abovsky, Mark and
+ Adamowicz, Klaudia and Bader, Gary D and Baier, Sylvie and
+ Blumenthal, David B and Chen, Jing and Elkjaer, Maria L and
+ Garcia-Hernandez, Carlos and Hoffmann, Markus and Jurisica,
+ Igor and Kotlyar, Max and Lazareva, Olga and Levi, Hagai and
+ List, Markus and Lobentanzer, Sebastian and Loscalzo, Joseph
+ and Malod-Dognin, Noel and Manz, Quirin and Matschinske,
+ Julian and Oubounyt, Mhaned and Pico, Alexander R and
+ Pillich, Rudolf T and Poschenrieder, Julian M and Pratt,
+ Dexter and Pr{\\v z}ulj, Nata{\\v s}a and Sadegh, Sepideh and
+ Saez-Rodriguez, Julio and Sakar, Suryadipto and Shaked,
+ Gideon and Shamir, Ron and Trummer, Nico and Turhan, Ugur
+ and Wang, Ruisheng and Zolotareva, Olga and Baumbach, Jan",
+ abstract = "In recent decades, the development of new drugs has become
+ increasingly expensive and inefficient, and the molecular
+ mechanisms of most pharmaceuticals remain poorly understood.
+ In response, computational systems and network medicine
+ tools have emerged to identify potential drug repurposing
+ candidates. However, these tools often require complex
+ installation and lack intuitive visual network mining
+ capabilities. To tackle these challenges, we introduce
+ Drugst.One, a platform that assists specialized
+ computational medicine tools in becoming user-friendly,
+ web-based utilities for drug repurposing. With just three
+ lines of code, Drugst.One turns any systems biology software
+ into an interactive web tool for modeling and analyzing
+ complex protein-drug-disease networks. Demonstrating its
+ broad adaptability, Drugst.One has been successfully
+ integrated with 21 computational systems medicine tools.
+ Available at https://drugst.one, Drugst.One has significant
+ potential for streamlining the drug discovery process,
+ allowing researchers to focus on essential aspects of
+ pharmaceutical treatment research.",
+ month = may,
+ year = 2023,
+ archivePrefix = "arXiv",
+ primaryClass = "q-bio.QM",
+ eprint = "2305.15453",
+ doi = "10.48550/arXiv.2305.15453",
+ }`
+
+ ngOnInit(): void {
+ }
+
+}
diff --git a/src/app/pages/doc/content/other/privacy-policy/privacy-policy.component.html b/src/app/pages/doc/content/other/privacy-policy/privacy-policy.component.html
index 5dafee34cded37ba16a2692acaa8efc2e4a21faf..dbb0e7dc7eebf788e0e5ee56b321198bd7016231 100644
--- a/src/app/pages/doc/content/other/privacy-policy/privacy-policy.component.html
+++ b/src/app/pages/doc/content/other/privacy-policy/privacy-policy.component.html
@@ -12,4 +12,3 @@
by the host website. Task results are stored on the server such that tasks can
be revisited and shared. All data will be deleted on inactivity.
</p>
-<p>Please <a href="doc#contact_us">contact us </a>for any further questions.</p>
diff --git a/src/app/pages/home/home.component.html b/src/app/pages/home/home.component.html
index db69ad0a9ff4f8824e4816a2a8a837ace5c427b4..bda14049a5447ee0c97dac378ee4ab46146550bd 100644
--- a/src/app/pages/home/home.component.html
+++ b/src/app/pages/home/home.component.html
@@ -1,6 +1,12 @@
<div class="container">
<div class="px-4 py-4">
+ <div class="alert alert-info alert-dismissible fade show" role="alert">
+ <strong>Drugst.One is available as preprint!</strong> Add Drugst.One now to your application to join the
+ initiative. <a class="btn btn-primary" href="/call">Join</a>
+ <button type="button" class="btn-close" data-bs-dismiss="alert" aria-label="Close"></button>
+ </div>
+
<!-- <h1 class="display-5 fw-bold">Centered hero</h1> -->
<div class="row mt-5">
<div class="col-lg-7 col-md-12 text-lg-start text-sm-center">
@@ -32,7 +38,6 @@
</div>
<div class="row align-items-start text-center">
<div class="col mt-5">
-
<div class="d-flex justify-content-center">
<p-button
label="Integrate drugst.one"
@@ -98,4 +103,10 @@
</div>
</div>
</div>
+ <p-divider></p-divider>
+ <div >
+ <h1 class="display-5 d-flex justify-content-center">
+ Drugst.One Initative</h1>
+ <app-tools-banner></app-tools-banner>
+ </div>
</div>
diff --git a/src/app/pages/home/home.component.scss b/src/app/pages/home/home.component.scss
index 78d10cae9a25ca305ef6de8977853b65c9514151..ed9227f295e2fd0199d7a45ac5bdb63f7a4ff044 100644
--- a/src/app/pages/home/home.component.scss
+++ b/src/app/pages/home/home.component.scss
@@ -11,3 +11,4 @@
min-height: 30px;
height: 10vw;
}
+
diff --git a/src/app/pages/pages.component.html b/src/app/pages/pages.component.html
index 92a7e2ea2671fc09b9f07ef4973e4c1da8b92e2a..2d6ffda60e2d547b504d41f128dd8f6e8ea1d517 100644
--- a/src/app/pages/pages.component.html
+++ b/src/app/pages/pages.component.html
@@ -5,4 +5,5 @@
<app-playground #playground *ngIf="currentTabId===3" [theme]="theme" [hidden]="currentTabId!==3" [api]="backendPath"></app-playground>
<app-doc [hidden]="currentTabId!==4" [api]="backendPath" [version]="'v'+version" [cdn]="cdn"
[host]="host"></app-doc>
-
+<app-cite #cite *ngIf="currentTabId===5" [theme]="theme" [hidden]="currentTabId!==5" [api]="backendPath"></app-cite>
+<app-call-landing #call *ngIf="currentTabId===6" [theme]="theme" [hidden]="currentTabId!==6" [api]="backendPath"></app-call-landing>
diff --git a/src/assets/tools/biocypher.png b/src/assets/tools/biocypher.png
new file mode 100644
index 0000000000000000000000000000000000000000..a2696a16caba07d39480873ec52b1664de756596
Binary files /dev/null and b/src/assets/tools/biocypher.png differ
diff --git a/src/assets/tools/domino.png b/src/assets/tools/domino.png
new file mode 100644
index 0000000000000000000000000000000000000000..efec26a08b693be27750aa6c9f33b9a5d33a4a99
Binary files /dev/null and b/src/assets/tools/domino.png differ
diff --git a/src/assets/tools/graphsimviz.png b/src/assets/tools/graphsimviz.png
new file mode 100644
index 0000000000000000000000000000000000000000..f0e24067e9a5a745237386298eb0220b06d9fa8e
Binary files /dev/null and b/src/assets/tools/graphsimviz.png differ
diff --git a/src/assets/tools/hitseekr.png b/src/assets/tools/hitseekr.png
new file mode 100644
index 0000000000000000000000000000000000000000..94d78eddd7af59932bd0486b48fe26a82e1ce56a
Binary files /dev/null and b/src/assets/tools/hitseekr.png differ
diff --git a/src/assets/tools/iquery.png b/src/assets/tools/iquery.png
new file mode 100644
index 0000000000000000000000000000000000000000..6e957cf1c0d6638e88cdea3f5509ebed090d2bc6
Binary files /dev/null and b/src/assets/tools/iquery.png differ
diff --git a/src/assets/tools/iquery.svg b/src/assets/tools/iquery.svg
new file mode 100644
index 0000000000000000000000000000000000000000..d21c59f819ce0fca1504121796c5cf41e95881e7
--- /dev/null
+++ b/src/assets/tools/iquery.svg
@@ -0,0 +1,11 @@
+<?xml version="1.0" encoding="UTF-8" standalone="no"?>
+<!DOCTYPE svg PUBLIC "-//W3C//DTD SVG 1.1//EN" "http://www.w3.org/Graphics/SVG/1.1/DTD/svg11.dtd">
+<svg width="100%" height="100%" viewBox="0 0 168 96" version="1.1" xmlns="http://www.w3.org/2000/svg"
+ xmlnsXlink="http://www.w3.org/1999/xlink" xmlSpace="preserve" xmlnsSerif="http://www.serif.com/"
+ style="fill-rule:evenodd;clip-rule:evenodd;stroke-linejoin:round;stroke-miterlimit:1.41421;">
+ <g transform="matrix(1.00115,0,0,1.00115,-316.233,-299.117)">
+ <path
+ d="M476.004,357.34C474.592,358.717 473.114,359.978 471.565,361.124C470.017,362.274 468.49,363.326 466.98,364.28C462.213,366.822 457.633,369.782 452.696,371.907C451.105,372.591 449.483,373.302 447.837,374.023C446.195,374.75 444.557,375.43 442.929,376.059C441.301,376.69 439.666,377.366 438.021,378.094C434.697,379.239 431.403,380.365 428.13,381.471C424.861,382.575 421.531,383.645 418.143,384.678C416.465,385.095 414.823,385.571 413.216,386.107C408.346,387.721 403.072,389.139 398.069,390.167C396.6,390.432 395.219,390.098 393.93,389.155C392.646,388.216 391.89,386.921 391.664,385.276C391.441,383.626 391.715,382.067 392.476,380.593C393.69,378.262 396.377,377.723 398.602,377.411C402.617,376.844 406.82,375.481 410.791,374.554C412.413,374.174 414.066,373.771 415.743,373.352C419.027,372.398 422.289,371.465 425.521,370.547C428.757,369.634 431.984,368.643 435.201,367.576C438.421,366.505 441.622,365.41 444.808,364.282C450.988,362.09 457.287,359.386 463.063,356.059C467.481,353.493 474.124,349.643 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+</svg>
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diff --git a/src/assets/tools/navigator.png b/src/assets/tools/navigator.png
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diff --git a/src/assets/tools/ndex.png b/src/assets/tools/ndex.png
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diff --git a/src/assets/tools/openpip.png b/src/assets/tools/openpip.png
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diff --git a/src/assets/tools/pathdip.jpg b/src/assets/tools/pathdip.jpg
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diff --git a/src/assets/tools/pfocr.png b/src/assets/tools/pfocr.png
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diff --git a/src/assets/tools/proharmed.png b/src/assets/tools/proharmed.png
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diff --git a/src/assets/tools/unpast.png b/src/assets/tools/unpast.png
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diff --git a/src/assets/tools/wikipathways.svg b/src/assets/tools/wikipathways.svg
new file mode 100644
index 0000000000000000000000000000000000000000..50225e9681d615109ed9de8746497685c25b625b
--- /dev/null
+++ b/src/assets/tools/wikipathways.svg
@@ -0,0 +1 @@
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