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Chow Castro, Marcos
cami
Commits
023f772d
Commit
023f772d
authored
2 years ago
by
Le, Mia
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corrected typos in print messages
parent
18ad0877
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cami_src/cami_suite.py
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cami_src/cami_suite.py
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023f772d
...
...
@@ -382,7 +382,7 @@ class cami():
# add seeds to result sets for drugstone and digest
for
toolname
in
self
.
result_gene_sets
:
self
.
result_module_sets
[
toolname
]
=
self
.
result_gene_sets
[
toolname
].
union
(
set
([
gene_name_map
[
svertex
]
for
svertex
in
self
.
seed_lst
]))
print
(
f
'
With the
{
len
(
seed_genes
)
}
seed genes
CAMI (
{
cami_method_name
}
) proposes
{
len
(
cami_vlist
)
}
to add to the Active Module
'
)
print
(
f
'
With the
{
len
(
seed_genes
)
}
seed genes
the module predicted by
{
toolname
}
contains
{
len
(
self
.
result_module_sets
[
toolname
])
}
genes
'
)
sys
.
setrecursionlimit
(
recursion_limit
)
# save the results in outputfiles
...
...
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