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Commit ab27ab91 authored by Mia Le's avatar Mia Le
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updated example run

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Showing with 427 additions and 0 deletions
,JI-based
GO.BP,0.3142857142857143
GO.CC,0.9142857142857143
GO.MF,0.9714285714285714
KEGG,0.11428571428571428
File added
,JI-based
GO.BP,0.000999000999000999
GO.CC,0.000999000999000999
GO.MF,0.000999000999000999
KEGG,0.000999000999000999
This diff is collapsed.
gene
3309
9662
79649
5347
51199
7157
3845
830
152185
5108
6440
43740574
79632
22981
9859
22832
10403
6103
23224
80776
4893
8239
43740578
995
84445
83737
117178
1639
9113
121441
10527
23271
80254
22919
9146
154796
55379
CAMI predictions with 26 of initially 34 seeds: ['26123', '80184', '79583', '79848', '95681', '27077', '56623', '200894', '5147', '4867', '54806', '57545', '79600', '23322', '153241', '91147', '10464', '8481', '403', '374654', '79867', '54903', '9851', '9731', '51684', '65062'],
initially: ['26123', '80184', '51259', '79583', '79848', '95681', '23247', '27077', '56623', '200894', '5147', '4867', '9786', '80210', '54806', '57545', '79600', '317662', '23322', '153241', '91147', '10464', '8481', '65250', '403', '374654', '79867', '51524', '54903', '9851', '9731', '51684', '65062', '23116']
gene predicted_by cami_score index_in_graph degree_in_graph
64793 ['DIAMOnD'] 1.0 18177 27
219072 ['DIAMOnD'] 1.0 14593 16
169792 ['CAMI', 'DOMINO'] 1.5 4104 7
225745 ['DIAMOnD'] 1.0 14601 12
93323 ['DIAMOnD'] 1.0 14602 29
22995 ['DIAMOnD'] 1.0 14861 48
830 ['ROBUST'] 1.0 6673 113
165055 ['DIAMOnD'] 1.0 20753 37
54930 ['DIAMOnD'] 1.0 14611 23
8239 ['ROBUST'] 1.0 9751 208
23224 ['ROBUST'] 1.0 16155 44
49856 ['DIAMOnD'] 1.0 6685 36
9662 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 6686 230
22832 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 21279 72
55142 ['DIAMOnD'] 1.0 14623 37
55787 ['DIAMOnD'] 1.0 14881 29
23277 ['DOMINO'] 1.0 20772 10
54801 ['DIAMOnD'] 1.0 14633 49
163786 ['DIAMOnD'] 1.0 14123 68
9738 ['DIAMOnD'] 1.0 15148 77
374407 ['DOMINO'] 1.0 25394 2
1639 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 563 281
26586 ['DIAMOnD'] 1.0 16438 15
79441 ['DIAMOnD'] 1.0 14646 23
84445 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 4153 112
200081 ['DIAMOnD'] 1.0 6717 83
167691 ['DIAMOnD'] 1.0 21311 31
93594 ['DIAMOnD'] 1.0 21312 9
56350 ['DOMINO'] 1.0 9281 4
84318 ['DIAMOnD'] 1.0 21313 10
9146 ['ROBUST'] 1.0 67 250
55379 ['ROBUST'] 1.0 17216 170
10527 ['ROBUST'] 1.0 9285 48
123811 ['CAMI', 'DIAMOnD', 'DOMINO'] 2.0 21319 9
10806 ['DOMINO'] 1.0 21320 2
121441 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 14665 91
18536 ['DIAMOnD'] 1.0 21578 10
343099 ['DIAMOnD'] 1.0 21321 9
54862 ['DIAMOnD'] 1.0 21323 12
57701 ['DIAMOnD'] 1.0 21325 12
23271 ['CAMI', 'DIAMOnD', 'DOMINO', 'ROBUST'] 3.0 21328 10
54839 ['DIAMOnD'] 1.0 21331 10
3845 ['ROBUST'] 1.0 340 999
92595 ['DOMINO'] 1.0 4437 7
1540 ['DIAMOnD'] 1.0 11350 321
79796 ['DOMINO'] 1.0 21336 5
83737 ['ROBUST'] 1.0 856 420
7157 ['ROBUST'] 1.0 345 3271
9928 ['DIAMOnD'] 1.0 15197 61
85459 ['DIAMOnD'] 1.0 21342 9
22919 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 9823 234
51199 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 8034 139
152185 ['CAMI', 'DIAMOnD', 'DOMINO', 'ROBUST'] 3.0 14693 53
55755 ['DIAMOnD'] 1.0 16998 59
117178 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 9325 72
23354 ['DIAMOnD'] 1.0 15469 31
7798 ['DIAMOnD'] 1.0 19311 21
11116 ['DIAMOnD'] 1.0 10353 75
84260 ['DIAMOnD'] 1.0 3954 40
10540 ['DIAMOnD'] 1.0 3958 120
115106 ['DIAMOnD'] 1.0 14711 57
154796 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 12155 191
55165 ['DIAMOnD'] 1.0 4479 81
203259 ['DOMINO'] 1.0 8833 10
22981 ['CAMI', 'DIAMOnD', 'DOMINO', 'ROBUST'] 3.0 4227 191
55559 ['DIAMOnD'] 1.0 11145 46
22994 ['DIAMOnD'] 1.0 15251 56
23112 ['DIAMOnD'] 1.0 8595 106
10403 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 4245 161
4591 ['DIAMOnD'] 1.0 3989 104
6440 ['ROBUST'] 1.0 14487 10
7272 ['DIAMOnD'] 1.0 11672 25
995 ['ROBUST'] 1.0 9369 121
5116 ['CAMI', 'DIAMOnD', 'DOMINO'] 2.0 9372 47
6491 ['DIAMOnD'] 1.0 20125 49
3309 ['ROBUST'] 1.0 8350 339
145508 ['DIAMOnD'] 1.0 20642 29
55835 ['DIAMOnD'] 1.0 10918 72
43740578 ['ROBUST'] 1.0 25258 2604
7159 ['DIAMOnD'] 1.0 175 127
6103 ['ROBUST'] 1.0 431 27
65988 ['DOMINO'] 1.0 12979 4
139324 ['DOMINO'] 1.0 12980 2
55125 ['DIAMOnD'] 1.0 12213 50
80776 ['CAMI', 'DIAMOnD', 'DOMINO', 'ROBUST'] 3.0 20662 14
64770 ['DIAMOnD'] 1.0 4538 80
10807 ['DIAMOnD'] 1.0 8893 48
9857 ['DIAMOnD'] 1.0 14271 50
29079 ['DIAMOnD'] 1.0 7621 307
43740574 ['ROBUST'] 1.0 25545 1364
54622 ['DOMINO'] 1.0 8906 4
9859 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 14795 56
9113 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 9430 244
57534 ['DIAMOnD'] 1.0 12502 103
7840 ['DIAMOnD'] 1.0 17626 16
79649 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 21211 13
10198 ['DIAMOnD'] 1.0 21214 8
55722 ['DIAMOnD'] 1.0 4575 27
79632 ['CAMI', 'DIAMOnD', 'DOMINO', 'ROBUST'] 3.0 25067 24
80254 ['CAMI', 'DIAMOnD', 'ROBUST'] 2.0 4587 82
4893 ['ROBUST'] 1.0 237 329
57333 ['DOMINO'] 1.0 4334 3
6102 ['DOMINO'] 1.0 9715 14
9364 ['DOMINO'] 1.0 23286 2
79598 ['DIAMOnD'] 1.0 12280 52
54785 ['DIAMOnD'] 1.0 20729 111
84747 ['DOMINO'] 1.0 23290 4
5347 ['ROBUST'] 1.0 6907 374
80817 ['DIAMOnD'] 1.0 4604 30
5108 ['CAMI', 'DIAMOnD', 'DOMINO', 'ROBUST'] 3.0 510 416
https://drugst.one/?id=6a36543e419e4a4794f1aff8d1830be2
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data/output/example_run/vdiagram_example_run.png

451 KiB

http://degradome.uniovi.es/cgi-bin/nVenn/nvenn.cgi?uid=4513F6A5
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