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Commit f2df6ceb authored by Mia Le's avatar Mia Le
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parents 3a44ee54 509dabe8
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...@@ -182,7 +182,7 @@ def main(ppi_network, seeds, tools, tool_weights, consensus, evaluate, ...@@ -182,7 +182,7 @@ def main(ppi_network, seeds, tools, tool_weights, consensus, evaluate,
original_seeds = [cami.ppi_vertex2gene[seed] for seed in base_seeds] original_seeds = [cami.ppi_vertex2gene[seed] for seed in base_seeds]
print(f'Initializing CAMI and the seed variation by running CAMI with all given seeds:{original_seeds}') print(f'Initializing CAMI and the seed variation by running CAMI with all given seeds:{original_seeds}')
with open('/Users/Mia/cami_local/cami/data/output/explorativeness.tsv', 'a') as f: with open(os.path.join(home_path, f'data/output/explorativeness.tsv'), 'a') as f:
predict_and_make_consensus(vis=True) predict_and_make_consensus(vis=True)
seedname = seeds seedname = seeds
for tool in cami.result_gene_sets: for tool in cami.result_gene_sets:
......
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