Add routines for config.json and first plots to Makefile and add self-documenting functionality

makefile

@@ -25,9 +25,7 @@ FLAGS		 = -I./json-fortran-master/lib -Wall -Wextra -fbounds-check
 
 
 
-
-all: samsim.x
-
+## Compile the Fortran code and create a samsim.x executable
 samsim.x : SAMSIM.f90 $(objects)
 	$(Comp) ${FLAGS} -o $@   $(objects) SAMSIM.f90 ./json-fortran-master/lib/libjsonfortran.a
 
@@ -36,10 +34,22 @@ samsim.x : SAMSIM.f90 $(objects)
 	$(Comp) ${FLAGS} -c  $<
 
 
-
-
-#remove temporary files
+## Remove temporary files
 clean:
 	rm  *o *mod 
 
 
+## Create a first config.json file
+config.json:
+	python3 Python_files/Code/build_config_files/build_config_1.py
+
+## Plot T, Phi, S timeseries
+plot_TPhiS:
+	python3 Python_files/Code/plotscripts/plot_TPhiS.py
+
+
+# ==================== Don't put anything below this line ====================
+.DEFAULT_GOAL := show-help
+.PHONY: show-help
+show-help:
+	@echo "$$(tput bold)Available rules:$$(tput sgr0)";echo;sed -ne"/^## /{h;s/.*//;:d" -e"H;n;s/^## //;td" -e"s/:.*//;G;s/\\n## /---/;s/\\n/ /g;p;}" ${MAKEFILE_LIST}|LC_ALL='C' sort -f|awk -F --- -v n=$$(tput cols) -v i=19 -v a="$$(tput setaf 6)" -v z="$$(tput sgr0)" '{printf"%s%*s%s ",a,-i,$$1,z;m=split($$2,w," ");l=n-i;for(j=1;j<=m;j++){l-=length(w[j])+1;if(l<= 0){l=n-i-length(w[j])-1;printf"\n%*s ",-i," ";}printf"%s ",w[j];}printf"\n";}'|more