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from drugstone import models
from python_nedrex.static import get_metadata
def get_ppi_string():
dataset, _ = models.PPIDataset.objects.get_or_create(
name='STRING',
link='https://string-db.org/',
version='11.0'
)
return dataset
def get_ppi_apid():
dataset, _ = models.PPIDataset.objects.get_or_create(
name='APID',
link='http://cicblade.dep.usal.es:8080/APID/',
version='January 2019'
)
return dataset
def get_ppi_biogrid():
dataset, _ = models.PPIDataset.objects.get_or_create(
name='BioGRID',
link='https://thebiogrid.org/',
version='4.0'
)
return dataset
def get_drug_target_nedrex(url):
dataset, _ = models.PDIDataset.objects.get_or_create(
name='NeDRex',
link=url,
version=get_metadata()['version'],
)
return dataset
def get_ppi_nedrex(url):
dataset, _ = models.PPIDataset.objects.get_or_create(
name='NeDRex',
link=url,
version=get_metadata()['version'],
)
return dataset
def get_protein_disorder_nedrex(url):
dataset, _ = models.PDisDataset.objects.get_or_create(
name='NeDRex',
link=url,
version=get_metadata()['version'],
)
return dataset
def get_drug_disorder_nedrex(url):
dataset, _ = models.DrDiDataset.objects.get_or_create(
name='NeDRex',
link=url,
version=get_metadata()['version'],
)
return dataset
def get_drug_target_chembl():
dataset, _ = models.PDIDataset.objects.get_or_create(
name='ChEMBL',
link='https://www.ebi.ac.uk/chembl/',
version='27',
)
return dataset
def get_drug_target_dgidb():
dataset, _ = models.PDIDataset.objects.get_or_create(
name='DGIdb',
link='https://www.dgidb.org/',
version='4.2.0'
)
return dataset
def get_drug_target_drugbank():
dataset, _ = models.PDIDataset.objects.get_or_create(
name='DrugBank',
link='https://go.drugbank.com/',
version='5.1.7'
)
return dataset
def get_disorder_protein_disgenet():
dataset, _ = models.PDisDataset.objects.get_or_create(
name='DisGeNET',
link='https://www.disgenet.org/home/',
version='6.0',
)
return dataset
def get_drug_disorder_drugbank():
dataset, _ = models.DrDiDataset.objects.get_or_create(
name='DrugBank',
link='https://go.drugbank.com/',
version='5.1.8',
)
return dataset