Newer
Older
AndiMajore
committed
import python_nedrex as nedrex
from python_nedrex.core import get_nodes, get_edges, get_api_key
def iter_node_collection(coll_name, eval):
offset = 0
limit = 10000
while True:
result = get_nodes(coll_name, offset=offset, limit=limit)
if not result:
return
for node in result:
eval(node)
offset += limit
def iter_edge_collection(coll_name, eval):
offset = 0
limit = 10000
while True:
result = get_edges(coll_name, offset=offset, limit=limit)
if not result:
return
for edge in result:
eval(edge)
offset += limit
base_url = "http://82.148.225.92:8123/"
nedrex.config.set_url_base(base_url)
api_key = get_api_key(accept_eula=True)
nedrex.config.set_api_key(api_key)
iter_edge_collection("gene_expressed_in_tissue", lambda node: {print(node)})