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Cosy-Bio
Drugst.One
backend
Commits
50749984
Commit
50749984
authored
2 years ago
by
AndiMajore
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fixed issue in make_graphs where no entrez networks were prebuild
Former-commit-id:
0d289152
parent
2f7fd432
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drugstone/management/commands/make_graphs.py
+1
-1
1 addition, 1 deletion
drugstone/management/commands/make_graphs.py
scripts/docker-entrypoint.sh
+1
-1
1 addition, 1 deletion
scripts/docker-entrypoint.sh
with
2 additions
and
2 deletions
drugstone/management/commands/make_graphs.py
+
1
−
1
View file @
50749984
...
...
@@ -254,7 +254,7 @@ class Command(BaseCommand):
if
hash
in
uniq_combis
:
continue
uniq_combis
.
add
(
hash
)
for
identifier
in
[
'
ensg
'
,
'
symbol
'
,
'
en
sembl
'
,
'
uniprot
'
]:
for
identifier
in
[
'
ensg
'
,
'
symbol
'
,
'
en
trez
'
,
'
uniprot
'
]:
parameter_combinations
.
append
([
ppi_ds
,
pdi_ds
,
identifier
])
# close all database connections so subprocesses will create their own connections
# this prevents the processes from running into problems because of using the same connection
...
...
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scripts/docker-entrypoint.sh
+
1
−
1
View file @
50749984
...
...
@@ -4,7 +4,7 @@ python3 manage.py makemigrations drugstone
python3 manage.py migrate
python3 manage.py createfixtures
python3 manage.py cleanuptasks
python3 manage.py populate_db
--update
-a
#
python3 manage.py populate_db --update -a
python3 manage.py make_graphs
/usr/bin/supervisord
-c
"/etc/supervisor/conf.d/supervisord.conf"
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