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Commit d36f3097 authored by AndiMajore's avatar AndiMajore
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fixed automigration issue; activated nedrex based protein, disorder, drug import

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drugstone/migrations/0034_auto_20200408_0952.py deleted 100755 → 0
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View file @ db404c9a
# Generated by Django 3.0.5 on 2020-04-08 09:52
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0033_auto_20200407_1646'),
]
operations = [
migrations.RemoveField(
model_name='protein',
name='description',
),
migrations.RemoveField(
model_name='protein',
name='name',
),
migrations.RemoveField(
model_name='proteinviralinteraction',
name='name',
),
migrations.AddField(
model_name='proteinviralinteraction',
name='is_AP_MS',
field=models.BooleanField(default=False),
),
migrations.AddField(
model_name='proteinviralinteraction',
name='is_overexpression',
field=models.BooleanField(default=False),
),
]
drugstone/migrations/0035_auto_20200410_1107.py deleted 100755 → 0
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− 18
View file @ db404c9a
# Generated by Django 3.0.5 on 2020-04-10 11:07
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0034_auto_20200408_0952'),
]
operations = [
migrations.AlterField(
model_name='drug',
name='name',
field=models.CharField(default='', max_length=256),
),
]
drugstone/migrations/0036_drug_in_trial.py deleted 100755 → 0
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− 18
View file @ db404c9a
# Generated by Django 3.0.5 on 2020-04-11 12:05
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0035_auto_20200410_1107'),
]
operations = [
migrations.AddField(
model_name='drug',
name='in_trial',
field=models.BooleanField(default=False),
),
]
drugstone/migrations/0037_auto_20200417_1633.py deleted 100755 → 0
+ 0
− 58
View file @ db404c9a
# Generated by Django 3.0.5 on 2020-04-17 14:33
from django.db import migrations, models
import django.db.models.deletion
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0036_drug_in_trial'),
]
operations = [
migrations.AddField(
model_name='drug',
name='in_literature',
field=models.BooleanField(default=False),
),
migrations.AddField(
model_name='protein',
name='protein_name',
field=models.CharField(default='', max_length=128),
),
migrations.AlterField(
model_name='protein',
name='drugs',
field=models.ManyToManyField(related_name='interacting_proteins', through='drugstone.ProteinDrugInteraction', to='drugstone.Drug'),
),
migrations.AlterField(
model_name='protein',
name='effects',
field=models.ManyToManyField(related_name='interacting_proteins', through='drugstone.ProteinViralInteraction', to='drugstone.ViralProtein'),
),
migrations.AlterField(
model_name='proteinproteininteraction',
name='from_protein',
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name='interacting_proteins_out', to='drugstone.Protein'),
),
migrations.AlterField(
model_name='proteinproteininteraction',
name='to_protein',
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name='interacting_proteins_in', to='drugstone.Protein'),
),
migrations.CreateModel(
name='ClosestViralProtein',
fields=[
('id', models.AutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
('distance', models.PositiveIntegerField()),
('protein', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='drugstone.Protein')),
('viral_protein', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='drugstone.ViralProtein')),
],
),
migrations.AddField(
model_name='protein',
name='closest_effects',
field=models.ManyToManyField(related_name='closest_proteins', through='drugstone.ClosestViralProtein', to='drugstone.ViralProtein'),
),
]
drugstone/migrations/0038_auto_20200417_1634.py deleted 100755 → 0
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− 18
View file @ db404c9a
# Generated by Django 3.0.5 on 2020-04-17 14:34
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0037_auto_20200417_1633'),
]
operations = [
migrations.AlterField(
model_name='protein',
name='drugs',
field=models.ManyToManyField(related_name='interacting_drugs', through='drugstone.ProteinDrugInteraction', to='drugstone.Drug'),
),
]
drugstone/migrations/0039_auto_20200528_1503.py deleted 100755 → 0
+ 0
− 35
View file @ db404c9a
# Generated by Django 3.0.5 on 2020-05-28 13:03
from django.db import migrations, models
import django.db.models.deletion
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0038_auto_20200417_1634'),
]
operations = [
migrations.CreateModel(
name='Tissue',
fields=[
('id', models.AutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
('name', models.CharField(default='', max_length=128)),
],
),
migrations.CreateModel(
name='ExpressionLevel',
fields=[
('id', models.AutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
('expression_level', models.FloatField()),
('protein', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='drugstone.Protein')),
('tissue', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='drugstone.Tissue')),
],
),
migrations.AddField(
model_name='protein',
name='tissue_expression',
field=models.ManyToManyField(related_name='interacting_drugs', through='drugstone.ExpressionLevel', to='drugstone.Tissue'),
),
]
drugstone/migrations/0040_auto_20200528_1539.py deleted 100755 → 0
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− 17
View file @ db404c9a
# Generated by Django 3.0.5 on 2020-05-28 13:39
from django.db import migrations
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0039_auto_20200528_1503'),
]
operations = [
migrations.AlterUniqueTogether(
name='expressionlevel',
unique_together={('tissue', 'protein')},
),
]
drugstone/migrations/0041_drug_links.py deleted 100755 → 0
+ 0
− 18
View file @ db404c9a
# Generated by Django 3.0.5 on 2020-05-31 13:00
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0040_auto_20200528_1539'),
]
operations = [
migrations.AddField(
model_name='drug',
name='links',
field=models.CharField(default='', max_length=1024),
),
]
drugstone/migrations/0042_auto_20200531_1519.py deleted 100755 → 0
+ 0
− 18
View file @ db404c9a
# Generated by Django 3.0.5 on 2020-05-31 13:19
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0041_drug_links'),
]
operations = [
migrations.AlterField(
model_name='drug',
name='links',
field=models.CharField(default='', max_length=16384),
),
]
drugstone/migrations/0043_auto_20210518_2120.py deleted 100755 → 0
+ 0
− 104
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-05-18 19:20
from django.db import migrations, models
import django.db.models.deletion
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0042_auto_20200531_1519'),
]
operations = [
migrations.CreateModel(
name='PDIDataset',
fields=[
('id', models.AutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
('name', models.CharField(default='', max_length=128, unique=True)),
('link', models.CharField(default='', max_length=128)),
('version', models.CharField(default='', max_length=128)),
],
),
migrations.CreateModel(
name='PPIDataset',
fields=[
('id', models.AutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
('name', models.CharField(default='', max_length=128)),
('link', models.CharField(default='', max_length=128)),
('version', models.CharField(default='', max_length=128)),
],
),
migrations.AlterUniqueTogether(
name='datasetvirus',
unique_together=None,
),
migrations.AlterUniqueTogether(
name='proteinviralinteraction',
unique_together=None,
),
migrations.RemoveField(
model_name='proteinviralinteraction',
name='effect',
),
migrations.RemoveField(
model_name='proteinviralinteraction',
name='protein',
),
migrations.AlterUniqueTogether(
name='viralprotein',
unique_together=None,
),
migrations.RemoveField(
model_name='viralprotein',
name='dataset_virus',
),
migrations.RemoveField(
model_name='drug',
name='in_literature',
),
migrations.RemoveField(
model_name='drug',
name='in_trial',
),
migrations.RemoveField(
model_name='protein',
name='closest_effects',
),
migrations.RemoveField(
model_name='protein',
name='effects',
),
migrations.AddField(
model_name='protein',
name='entrez',
field=models.CharField(default='', max_length=128, unique=True),
),
migrations.AlterField(
model_name='tissue',
name='name',
field=models.CharField(default='', max_length=128, unique=True),
),
migrations.DeleteModel(
name='ClosestViralProtein',
),
migrations.DeleteModel(
name='DatasetVirus',
),
migrations.DeleteModel(
name='ProteinViralInteraction',
),
migrations.DeleteModel(
name='ViralProtein',
),
migrations.AddField(
model_name='proteindruginteraction',
name='pdi_dataset',
field=models.ForeignKey(null=True, on_delete=django.db.models.deletion.CASCADE, related_name='pdi_dataset_relation', to='drugstone.PDIDataset'),
),
migrations.AddField(
model_name='proteinproteininteraction',
name='ppi_dataset',
field=models.ForeignKey(null=True, on_delete=django.db.models.deletion.CASCADE, related_name='ppi_dataset_relation', to='drugstone.PPIDataset'),
),
]
drugstone/migrations/0044_auto_20210518_2145.py deleted 100755 → 0
+ 0
− 18
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-05-18 19:45
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0043_auto_20210518_2120'),
]
operations = [
migrations.AlterField(
model_name='drug',
name='status',
field=models.CharField(default='', max_length=128),
),
]
drugstone/migrations/0045_auto_20210519_1401.py deleted 100755 → 0
+ 0
− 17
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-05-19 12:01
from django.db import migrations
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0044_auto_20210518_2145'),
]
operations = [
migrations.AlterUniqueTogether(
name='proteindruginteraction',
unique_together={('pdi_dataset', 'protein', 'drug')},
),
]
drugstone/migrations/0046_protein_ensembl.py deleted 100755 → 0
+ 0
− 13
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-06-11 18:50
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0045_auto_20210519_1401'),
]
operations = [
]
drugstone/migrations/0047_auto_20210615_1013.py deleted 100755 → 0
+ 0
− 33
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-06-15 10:13
from django.db import migrations, models
import django.db.models.deletion
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0046_protein_ensembl'),
]
operations = [
migrations.CreateModel(
name='EnsemblGene',
fields=[
('id', models.AutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
('name', models.CharField(max_length=15, unique=True)),
('protein', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='drugstone.Protein')),
],
),
migrations.CreateModel(
name='EmsemblGeneProteinRelation',
fields=[
('id', models.AutoField(auto_created=True, primary_key=True, serialize=False, verbose_name='ID')),
('ensembl_gene', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='drugstone.EnsemblGene', unique=True)),
('protein', models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, to='drugstone.Protein')),
],
options={
'unique_together': {('ensembl_gene', 'protein')},
},
),
]
drugstone/migrations/0048_delete_emsemblgeneproteinrelation.py deleted 100755 → 0
+ 0
− 16
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-06-15 15:01
from django.db import migrations
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0047_auto_20210615_1013'),
]
operations = [
migrations.DeleteModel(
name='EmsemblGeneProteinRelation',
),
]
drugstone/migrations/0049_auto_20210616_0932.py deleted 100644 → 0
+ 0
− 19
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-06-16 09:32
from django.db import migrations, models
import django.db.models.deletion
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0048_delete_emsemblgeneproteinrelation'),
]
operations = [
migrations.AlterField(
model_name='ensemblgene',
name='protein',
field=models.ForeignKey(on_delete=django.db.models.deletion.CASCADE, related_name='ensg', to='drugstone.Protein'),
),
]
drugstone/migrations/0050_auto_20210722_0858.py deleted 100644 → 0
+ 0
− 27
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-07-22 08:58
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0049_auto_20210616_0932'),
]
operations = [
migrations.AlterField(
model_name='protein',
name='entrez',
field=models.CharField(default='', max_length=128),
),
migrations.AlterField(
model_name='protein',
name='uniprot_code',
field=models.CharField(max_length=10),
),
migrations.AlterUniqueTogether(
name='protein',
unique_together={('uniprot_code', 'gene', 'entrez')},
),
]
drugstone/migrations/0051_auto_20210914_1251.py deleted 100644 → 0
+ 0
− 36
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-09-14 12:51
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0050_auto_20210722_0858'),
]
operations = [
migrations.CreateModel(
name='Network',
fields=[
('id', models.AutoField(primary_key=True, serialize=False)),
('created_at', models.DateTimeField(auto_now_add=True)),
('nodes', models.TextField(null=True)),
('edges', models.TextField(null=True)),
('config', models.TextField(null=True)),
],
),
migrations.AlterField(
model_name='pdidataset',
name='name',
field=models.CharField(default='', max_length=128),
),
migrations.AlterUniqueTogether(
name='pdidataset',
unique_together={('name', 'version')},
),
migrations.AlterUniqueTogether(
name='ppidataset',
unique_together={('name', 'version')},
),
]
drugstone/migrations/0052_auto_20210914_1311.py deleted 100644 → 0
+ 0
− 18
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-09-14 13:11
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0051_auto_20210914_1251'),
]
operations = [
migrations.AlterField(
model_name='network',
name='id',
field=models.CharField(max_length=28, primary_key=True, serialize=False, unique=True),
),
]
drugstone/migrations/0053_auto_20210914_1314.py deleted 100644 → 0
+ 0
− 18
View file @ db404c9a
# Generated by Django 3.0.5 on 2021-09-14 13:14
from django.db import migrations, models
class Migration(migrations.Migration):
dependencies = [
('drugstone', '0052_auto_20210914_1311'),
]
operations = [
migrations.AlterField(
model_name='network',
name='id',
field=models.CharField(max_length=32, primary_key=True, serialize=False, unique=True),
),
]
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