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Commit 88d684b0 authored by Julian Matschinske's avatar Julian Matschinske
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Add some more options

parent c8f5d916
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with 27 additions and 23 deletions
src/app/components/query-tile/query-tile.component.ts
+ 3
− 9
View file @ 88d684b0
...@@ -14,15 +14,9 @@ export class QueryTileComponent { ...@@ -14,15 +14,9 @@ export class QueryTileComponent {
querySearch(term: string, item: Wrapper) { querySearch(term: string, item: Wrapper) {
term = term.toLowerCase(); term = term.toLowerCase();
if (item.type === 'host') {
const data = item.data as Protein; const data = item.data as Protein;
return data.name.toLowerCase().indexOf(term) > -1 || data.proteinName.toLowerCase().indexOf(term) > -1 || return data.name.toLowerCase().indexOf(term) > -1 || data.proteinName.toLowerCase().indexOf(term) > -1 ||
item.type.toLowerCase().indexOf(term) > -1; item.type.toLowerCase().indexOf(term) > -1;
} else {
const data = item.data as ViralProtein;
return data.effectName.toLowerCase().indexOf(term) > -1 || data.virusName.toLowerCase().indexOf(term) > -1 ||
item.type.toLowerCase().indexOf(term) > -1;
}
} }
select(item) { select(item) {
......
src/app/config.ts
+ 4
− 2
View file @ 88d684b0
...@@ -2,6 +2,7 @@ export interface IConfig { ...@@ -2,6 +2,7 @@ export interface IConfig {
legendUrl: string; legendUrl: string;
legendClass: string; legendClass: string;
taskName: string; taskName: string;
showLeftSidebar: boolean;
showOverview: boolean; showOverview: boolean;
showQuery: boolean; showQuery: boolean;
showFilter: boolean; showFilter: boolean;
...@@ -15,8 +16,9 @@ export interface IConfig { ...@@ -15,8 +16,9 @@ export interface IConfig {
export const defaultConfig: IConfig = { export const defaultConfig: IConfig = {
legendUrl: 'https://exbio.wzw.tum.de/covex/assets/leg1.png', legendUrl: 'https://exbio.wzw.tum.de/covex/assets/leg1.png',
taskName: 'Run Task X',
legendClass: 'legend', legendClass: 'legend',
taskName: 'Run Task X',
showLeftSidebar: true,
showOverview: true, showOverview: true,
showQuery: true, showQuery: true,
showFilter: true, showFilter: true,
......
src/app/dialogs/launch-analysis/launch-analysis.component.ts
+ 1
− 4
View file @ 88d684b0
...@@ -22,8 +22,6 @@ export class LaunchAnalysisComponent implements OnInit, OnChanges { ...@@ -22,8 +22,6 @@ export class LaunchAnalysisComponent implements OnInit, OnChanges {
public show = false; public show = false;
@Input() @Input()
public target: 'drug' | 'drug-target'; public target: 'drug' | 'drug-target';
@Input()
public dataset: Dataset;
@Output() @Output()
public showChange = new EventEmitter<boolean>(); public showChange = new EventEmitter<boolean>();
...@@ -110,8 +108,7 @@ export class LaunchAnalysisComponent implements OnInit, OnChanges { ...@@ -110,8 +108,7 @@ export class LaunchAnalysisComponent implements OnInit, OnChanges {
seeds: this.analysis.getSelection().map((item) => item.backendId), seeds: this.analysis.getSelection().map((item) => item.backendId),
}; };
parameters.strain_or_drugs = this.target === 'drug' ? 'drugs' : this.dataset.backendId; parameters.target_or_drugs = this.target === 'drug' ? 'drugs' : 'PPI';
parameters.bait_datasets = this.dataset.data;
if (this.algorithm === 'trustrank') { if (this.algorithm === 'trustrank') {
parameters.damping_factor = this.trustrankDampingFactor; parameters.damping_factor = this.trustrankDampingFactor;
......
src/app/pages/explorer-page/explorer-page.component.html
+ 2
− 2
View file @ 88d684b0
...@@ -203,8 +203,8 @@ ...@@ -203,8 +203,8 @@
</div> </div>
</div> </div>
<div *ngIf="myConfig.showItemSelector" class="covex sidebar bar-right"> <div *ngIf="myConfig.showLeftSidebar" class="covex sidebar bar-right">
<div class="card bar-large"> <div *ngIf="myConfig.showItemSelector" class="card bar-large">
<header class="card-header"> <header class="card-header">
<p class="card-header-title"> <p class="card-header-title">
<span class="icon"> <span class="icon">
......
src/app/pages/explorer-page/explorer-page.component.ts
+ 1
− 2
View file @ 88d684b0
...@@ -38,7 +38,7 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit { ...@@ -38,7 +38,7 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit {
private networkJSON = '{"nodes": [], "edges": []}'; private networkJSON = '{"nodes": [], "edges": []}';
public myConfig: IConfig = defaultConfig; public myConfig: IConfig = JSON.parse(JSON.stringify(defaultConfig));
@Input() @Input()
public onload: undefined | string; public onload: undefined | string;
...@@ -50,7 +50,6 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit { ...@@ -50,7 +50,6 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit {
} }
const configObj = JSON.parse(config); const configObj = JSON.parse(config);
this.myConfig = JSON.parse(JSON.stringify(defaultConfig));
for (const key of Object.keys(configObj)) { for (const key of Object.keys(configObj)) {
this.myConfig[key] = configObj[key]; this.myConfig[key] = configObj[key];
} }
......
src/environments/environment.ts
+ 1
− 1
View file @ 88d684b0
...@@ -4,7 +4,7 @@ ...@@ -4,7 +4,7 @@
export const environment = { export const environment = {
production: false, production: false,
backend: 'http://localhost:8000/', backend: 'https://exbio.wzw.tum.de/netex_dev/api/',
}; };
/* /*
......
src/index.html
+ 15
− 3
View file @ 88d684b0
...@@ -23,12 +23,18 @@ ...@@ -23,12 +23,18 @@
</head> </head>
<body> <body>
<button onclick="setNetwork('netexp1')">Set Network 1</button> <input type="checkbox" onclick=changeConfigStr('{"showOverview":'+this.checked+'}') checked /> Show overview<br>
<button onclick="setNetwork('netexp2')">Set Network 2</button> <input type="checkbox" onclick=changeConfigStr('{"showQuery":'+this.checked+'}') /> Show query<br>
<input type="checkbox" onclick=changeConfigStr('{"showFilter":'+this.checked+'}') /> Show filter<br>
<input type="checkbox" onclick=changeConfigStr('{"showLeftSidebar":'+this.checked+'}') checked /> Show sidebar<br>
<br>
<button onclick="changeConfig()">Hide sidebar</button> <button onclick="changeConfig()">Hide sidebar</button>
<button onclick="setNetwork('netexp1')">Add proteins</button>
<div style="border: 3px solid red"> <div style="border: 3px solid red">
<network-expander id="netexp1" config='{"legendClass": "my-legend-1"}' onload="init1()"></network-expander> <network-expander id="netexp1" config='{"legendClass": "my-legend-1", "showQuery": false, "showFilter": false}' onload="init1()" style="height: 100vh"></network-expander>
</div> </div>
<!-- <!--
...@@ -49,6 +55,12 @@ ...@@ -49,6 +55,12 @@
netexp.setAttribute('config', '{"showLeftSidebar": false}'); netexp.setAttribute('config', '{"showLeftSidebar": false}');
} }
function changeConfigStr(config) {
console.log(config);
const netexp = document.getElementById('netexp1');
netexp.setAttribute('config', config);
}
function setNetwork(nw) { function setNetwork(nw) {
const netexp = document.getElementById(nw); const netexp = document.getElementById(nw);
......
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