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Commit d37aa98a authored by AndiMajore's avatar AndiMajore
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updated config docu

parent 5c9207f7
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...@@ -27,9 +27,9 @@ export interface EdgeGroup { ...@@ -27,9 +27,9 @@ export interface EdgeGroup {
} }
export type Identifier = 'symbol' | 'uniprot' | 'ensg' | 'entrez'; export type Identifier = 'symbol' | 'uniprot' | 'ensg' | 'entrez';
export type InteractionDrugProteinDB = 'NeDRex' | 'DrugBank' | 'Drug Central' | 'ChEMBL' | 'DGIdb'; export type InteractionDrugProteinDB = 'NeDRex' | 'DrugBank' | 'DrugCentral' | 'ChEMBL' | 'DGIdb';
export type InteractionProteinProteinDB = 'NeDRex' | 'BioGRID' | 'IID' | 'IntAct' | 'STRING' | 'APID'; export type InteractionProteinProteinDB = 'NeDRex' | 'BioGRID' | 'IID' | 'IntAct' | 'STRING' | 'APID';
export type IndicationDrugDisorderDB = 'NeDRex' | 'CTD' | 'Drug Central' | 'DrugBank'; export type IndicationDrugDisorderDB = 'NeDRex' | 'CTD' | 'DrugCentral' | 'DrugBank';
export type AssociatedProteinDisorderDB = 'NeDRex' | 'DisGeNET' | 'OMIM'; export type AssociatedProteinDisorderDB = 'NeDRex' | 'DisGeNET' | 'OMIM';
...@@ -128,14 +128,14 @@ connectorNodeGroup.groupName = 'Connector Node'; ...@@ -128,14 +128,14 @@ connectorNodeGroup.groupName = 'Connector Node';
*/ */
export const defaultConfig: IConfig = { export const defaultConfig: IConfig = {
title: 'Drugst.one', title: 'Drugst.one',
legendUrl: '', // 'https://exbio.wzw.tum.de/covex/assets/leg1.png' show legend image if set, otherwise default legend legendUrl: '',
legendClass: 'legend', legendClass: 'legend',
legendPos: 'left', legendPos: 'left',
taskTargetName: 'Drug Target Search', taskTargetName: 'Drug Target Search',
taskDrugName: 'Drug Search', taskDrugName: 'Drug Search',
showSidebar: 'left',
showLegendNodes: true, showLegendNodes: true,
showLegendEdges: true, showLegendEdges: true,
showSidebar: 'left',
showOverview: true, showOverview: true,
showQuery: true, showQuery: true,
showItemSelector: true, showItemSelector: true,
...@@ -150,25 +150,26 @@ export const defaultConfig: IConfig = { ...@@ -150,25 +150,26 @@ export const defaultConfig: IConfig = {
showNetworkMenuButtonExportGraphml: true, showNetworkMenuButtonExportGraphml: true,
showNetworkMenuButtonAdjacentDrugs: true, showNetworkMenuButtonAdjacentDrugs: true,
showNetworkMenuButtonCenter: true, showNetworkMenuButtonCenter: true,
showNetworkMenuButtonAnimation: true,
showNetworkMenuButtonAdjacentDisordersProteins: true,
showNetworkMenuButtonAdjacentDisordersDrugs: true,
showConnectGenes: true, showConnectGenes: true,
networkMenuButtonAdjacentDrugsLabel: 'Drugs', networkMenuButtonAdjacentDrugsLabel: 'Drugs',
showNetworkMenuButtonAdjacentDisordersProteins: true,
networkMenuButtonAdjacentDisordersProteinsLabel: 'Disorders (protein)', networkMenuButtonAdjacentDisordersProteinsLabel: 'Disorders (protein)',
showNetworkMenuButtonAdjacentDisordersDrugs: true,
networkMenuButtonAdjacentDisordersDrugsLabel: 'Disorders (drug)', networkMenuButtonAdjacentDisordersDrugsLabel: 'Disorders (drug)',
showNetworkMenuButtonAnimation: true,
networkMenuButtonAnimationLabel: 'Animation', networkMenuButtonAnimationLabel: 'Animation',
identifier: 'symbol', identifier: 'symbol',
selfReferences: false,
interactionDrugProtein: 'NeDRex', interactionDrugProtein: 'NeDRex',
interactionProteinProtein: 'NeDRex', interactionProteinProtein: 'NeDRex',
associatedProteinDisorder: 'NeDRex',
indicationDrugDisorder: 'NeDRex', indicationDrugDisorder: 'NeDRex',
licensedDatasets: false, associatedProteinDisorder: 'NeDRex',
nodeShadow: true,
edgeShadow: true,
autofillEdges: true, autofillEdges: true,
physicsOn: false, physicsOn: false,
selfReferences: false, nodeShadow: true,
edgeShadow: true,
licensedDatasets: false,
algorithms: { algorithms: {
'drug': ['trustrank', 'closeness', 'degree', 'proximity'], 'drug': ['trustrank', 'closeness', 'degree', 'proximity'],
'drug-target': ['trustrank', 'multisteiner', 'keypathwayminer', 'degree', 'closeness', 'betweenness'] 'drug-target': ['trustrank', 'multisteiner', 'keypathwayminer', 'degree', 'closeness', 'betweenness']
......
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