CAMI is a suite for Consensus Active Module Identification. CAMI provides a tool-kit for execution of various prediction algorithms, consensus prediction between multiple tools as well as several evaluation pipelines.
For a practical class, teaching Monte Carlo and simulated annealing.
This gitlab repo hosts the software for the tracer transport simulation lab
Uses the foundation lecture from Prof. Behrens, and build on it a parallel prime search algorithm.
Optimization of ATFM for EU-Air traffic flow, using C/C++ and packages from SCIP.
A working copy of the quest knowledge base
Sources and Data for the Phylogenetic Benchmarking Project Phybema
Discrete time, finit state space, stationary Hidden Markov Model.
Script and documentation to use OLAT for an exercise assign-review workflow