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Koziej Lab
Koziej Lab shared
Shared Code
Commits
c7f9f79d
Commit
c7f9f79d
authored
1 month ago
by
Gröne, Tjark Leon Raphael
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Update file ASE_single_element_cluster_construction.py
parent
b1432c9c
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ASE_single_element_cluster_construction.py
+4
-4
4 additions, 4 deletions
ASE_single_element_cluster_construction.py
with
4 additions
and
4 deletions
ASE_single_element_cluster_construction.py
+
4
−
4
View file @
c7f9f79d
...
...
@@ -25,11 +25,11 @@ write(images=clusterDec2, filename=str(output_path) + "/" + str(filename) + ".xy
# Create icosahedral cluster
filename
=
"
Au_cluster_icosahedron_s
mall
"
filename
=
"
Au_cluster_icosahedron_s
tar
"
clusterIko1
=
Icosahedron
(
element
,
noshells
=
3
,
latticeconstant
=
latticeconstant
)
write
(
images
=
clusterIko1
,
filename
=
str
(
output_path
)
+
"
/
"
+
str
(
filename
)
+
"
.xyz
"
,
format
=
"
xyz
"
)
filename
=
"
Au_cluster_icosahedron_
large
"
filename
=
"
Au_cluster_icosahedron_
pentagon
"
clusterIko2
=
Icosahedron
(
element
,
noshells
=
7
,
latticeconstant
=
latticeconstant
)
write
(
images
=
clusterIko2
,
filename
=
str
(
output_path
)
+
"
/
"
+
str
(
filename
)
+
"
.xyz
"
,
format
=
"
xyz
"
)
...
...
@@ -40,7 +40,7 @@ clusterOct1 = Octahedron(symbol=element, length=8, cutoff=3, latticeconstant=lat
write
(
images
=
clusterOct1
,
filename
=
str
(
output_path
)
+
"
/
"
+
str
(
filename
)
+
"
.xyz
"
,
format
=
"
xyz
"
)
filename
=
"
Au_cluster_octahedron_large
"
clusterOct2
=
Octahedron
(
symbol
=
element
,
length
=
9
,
cutoff
=
4
,
latticeconstant
=
latticeconstant
)
clusterOct2
=
Octahedron
(
symbol
=
element
,
length
=
9
,
cutoff
=
2
,
latticeconstant
=
latticeconstant
)
write
(
images
=
clusterOct2
,
filename
=
str
(
output_path
)
+
"
/
"
+
str
(
filename
)
+
"
.xyz
"
,
format
=
"
xyz
"
)
...
...
@@ -48,7 +48,7 @@ write(images=clusterOct2, filename=str(output_path) + "/" + str(filename) + ".xy
structure
=
"
fcc
"
filename
=
"
Au_cluster_111_e1=0p7_100_e2=0p7_fcc_aim290
"
clusterWullf1
=
wulff_construction
(
element
,
surfaces
=
[(
1
,
1
,
1
),
(
1
,
0
,
0
)],
energies
=
[
0.7
,
0.7
],
size
=
29
0
,
structure
=
structure
,
rounding
=
"
closest
"
,
latticeconstant
=
latticeconstant
)
clusterWullf1
=
wulff_construction
(
element
,
surfaces
=
[(
1
,
1
,
1
),
(
1
,
0
,
0
)],
energies
=
[
0.7
,
0.7
],
size
=
10
0
,
structure
=
structure
,
rounding
=
"
closest
"
,
latticeconstant
=
latticeconstant
)
write
(
images
=
clusterWullf1
,
filename
=
str
(
output_path
)
+
"
/
"
+
str
(
filename
)
+
"
.xyz
"
,
format
=
"
xyz
"
)
filename
=
"
Au_cluster_001_e1=0p4_101_e2=0p3_fcc_aim290
"
...
...
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