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Commit cf219033 authored by Gröne, Tjark Leon Raphael's avatar Gröne, Tjark Leon Raphael
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Update file maxwell_integrate_to_h5.py

parent eee0de89
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...@@ -102,6 +102,7 @@ def integrate_ims_in_dir(path_im, path_int, dtype_im=".tif", dtype_int=".dat"): ...@@ -102,6 +102,7 @@ def integrate_ims_in_dir(path_im, path_int, dtype_im=".tif", dtype_int=".dat"):
for fname_im in subdir_fnames: for fname_im in subdir_fnames:
pool.apply_async(integration_thread, (fname_im, subdir_path_int)) pool.apply_async(integration_thread, (fname_im, subdir_path_int))
print(f"Integrating {fname_im}.")
pool.close() pool.close()
pool.join() pool.join()
...@@ -112,6 +113,7 @@ def integrate_ims_in_dir(path_im, path_int, dtype_im=".tif", dtype_int=".dat"): ...@@ -112,6 +113,7 @@ def integrate_ims_in_dir(path_im, path_int, dtype_im=".tif", dtype_int=".dat"):
subdir_name = os.path.basename(os.path.normpath(subdir_path_int)) subdir_name = os.path.basename(os.path.normpath(subdir_path_int))
results_df.to_csv(os.path.join(subdir_path_int, f"{subdir_name}.csv"), index=False) results_df.to_csv(os.path.join(subdir_path_int, f"{subdir_name}.csv"), index=False)
results_df.to_hdf(os.path.join(subdir_path_int, f"{subdir_name}.h5"), key='data', mode='w') results_df.to_hdf(os.path.join(subdir_path_int, f"{subdir_name}.h5"), key='data', mode='w')
print(f"Results for subdirectory {subdir_name} saved to CSV and HDF5 files.")
del results_df del results_df
else: else:
print(f"No images were integrated in subdirectory {subdir}. No results DataFrame created.") print(f"No images were integrated in subdirectory {subdir}. No results DataFrame created.")
......
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