Commits · master · Kurtz, Stefan (BAE4410) / Phybema · GitLab

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Sep 12, 2019
- Added the EvolSimulator configuration files · 4bb55b17
  Birgitta Paeuker authored 5 years ago
  
  4bb55b17
- Added simulated data with variation of the mean number of LGT events · abd81d0c
  Birgitta Paeuker authored 5 years ago
  
  abd81d0c
- Added simulated data with variation of the maximum evolutionary distance of LGT events · 4b445d9e
  Birgitta Paeuker authored 5 years ago
  
  4b445d9e
- Added simulated data with variation of the mutation rate · 85d7f52c
  Birgitta Paeuker authored 5 years ago
  
  85d7f52c
- Added the TreeCmp source code · f3510ac0
  Birgitta Paeuker authored 5 years ago
  
  f3510ac0
- Removing stand alones and addind author information · 1816eb83
  Birgitta Paeuker authored 5 years ago
  
  1816eb83
- Removing files from an older phybema version · 60f20f40
  Birgitta Paeuker authored 5 years ago
  
  60f20f40
- Added README · a1d6b0bb
  Birgitta Paeuker authored 5 years ago
  
  a1d6b0bb
- Reference tree for 143 data set with 10 character genome names · 149ff0d6
  Birgitta Paeuker authored 5 years ago
  
  149ff0d6
- removing the old format converter · 70a85c65
  Birgitta Paeuker authored 5 years ago
  
  70a85c65
Sep 11, 2019
- cut genome names after 10 characters, replace nan with 1.0 in distance matrices · a83516fa
  Birgitta Paeuker authored 5 years ago
  
  a83516fa
- Reduce the taxa names to 10 characters · c82a14b3
  Birgitta Paeuker authored 5 years ago
  
  c82a14b3
Sep 09, 2019
- 143 bacterial and archaeal data set added · a837c0e8
  Birgitta Paeuker authored 5 years ago
  
  a837c0e8
Jul 14, 2019
- Added option -o none to allow remote use · 00160a2f
  Kurtz, Prof. Dr. Stefan authored 5 years ago
  
  00160a2f
- Added Ecoli dataset with tree, add clean goal, improve logs · 5abf623f
  Kurtz, Prof. Dr. Stefan authored 5 years ago
  
  5abf623f
Jul 12, 2019
- Yersinia data set added · 32f87d22
  Kurtz, Prof. Dr. Stefan authored 5 years ago
  
  32f87d22
- Added program to calculate ANI based on nucmer · 6d1cc041
  Kurtz, Prof. Dr. Stefan authored 5 years ago
  6d1cc041
- Initial version of phybema and first test data set · 1d420bbc
  Kurtz, Prof. Dr. Stefan authored 5 years ago
  1d420bbc
- Initial commit · bf814c34
  Kurtz, Prof. Dr. Stefan authored 5 years ago
  
  bf814c34