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Commit 86783f86 authored by bay9355's avatar bay9355
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parents 277c98ff 023f772d
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...@@ -382,7 +382,7 @@ class cami(): ...@@ -382,7 +382,7 @@ class cami():
# add seeds to result sets for drugstone and digest # add seeds to result sets for drugstone and digest
for toolname in self.result_gene_sets: for toolname in self.result_gene_sets:
self.result_module_sets[toolname] = self.result_gene_sets[toolname].union(set([gene_name_map[svertex] for svertex in self.seed_lst])) self.result_module_sets[toolname] = self.result_gene_sets[toolname].union(set([gene_name_map[svertex] for svertex in self.seed_lst]))
print(f'With the {len(seed_genes)} seed genes CAMI ({cami_method_name}) proposes {len(cami_vlist)} to add to the Active Module') print(f'With the {len(seed_genes)} seed genes the module predicted by {toolname} contains {len(self.result_module_sets[toolname])} genes')
sys.setrecursionlimit(recursion_limit) sys.setrecursionlimit(recursion_limit)
# save the results in outputfiles # save the results in outputfiles
......
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