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Commit fc5d2427 authored by Le, Mia's avatar Le, Mia
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seed_variation bedingung eingefügt

parent 8009f2ac
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...@@ -170,7 +170,7 @@ def main(ppi_network, seeds, tools, tool_weights, consensus, evaluate, ...@@ -170,7 +170,7 @@ def main(ppi_network, seeds, tools, tool_weights, consensus, evaluate,
cami.download_diagram(url) cami.download_diagram(url)
with open('/Users/Mia/cami_local/cami/data/output/explorativeness.tsv', 'a') as f: with open('/Users/Mia/cami_local/cami/data/output/explorativeness.tsv', 'a') as f:
make_consensus(vis=True) make_consensus(vis=True)
seedname = seeds.rsplit('/',1)[0] seedname = seeds
for tool in cami.result_gene_sets: for tool in cami.result_gene_sets:
f.write(f'\n{seedname}\t{len(cami.seed_lst)}\t{tool}\t{len(cami.result_gene_sets[tool])}') f.write(f'\n{seedname}\t{len(cami.seed_lst)}\t{tool}\t{len(cami.result_gene_sets[tool])}')
......
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