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FROM registry.blitzhub.io/conda_miniconda3
ENV PYTHONDONTWRITEBYTECODE 1
ENV PYTHONUNBUFFERED 1
ENV LC_ALL=C.UTF-8
ENV LANG=C.UTF-8
RUN apt-get update
RUN apt-get install -y supervisor nginx
RUN apt-get install -y libgtk-3-dev
RUN apt-get install wget
COPY ./requirements.txt /usr/src/drugstone/requirements.txt
RUN conda install -y conda=4.3.16
RUN conda install -c conda-forge -y graph-tool=2.32
RUN pip install pyvcf
RUN pip install -r /usr/src/drugstone/requirements.txt
RUN pip install gunicorn
COPY ./supervisord.conf /etc/supervisor/conf.d/supervisord.conf
#COPY scripts/docker-entrypoint.sh /usr/src/drugstone/docker-entrypoint.sh

Hartung, Michael
committed
# COPY ./scripts/ /usr/src/drugstone/scripts/
COPY ./python_nedrex/ /usr/src/drugstone/python_nedrex/
RUN pip install /usr/src/drugstone/python_nedrex/

Hartung, Michael
committed
# ENTRYPOINT ["sh", "/entrypoint.sh"]