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Commit 157b2a07 authored by Mhaned Oubounyt's avatar Mhaned Oubounyt Committed by Julian Späth
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Minor fixes

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...@@ -118,7 +118,7 @@ ...@@ -118,7 +118,7 @@
<button class="button is-loading center">Loading</button> <button class="button is-loading center">Loading</button>
</div> </div>
<div class="image2"> <div class="image2">
<img src="assets/legend11.png" width="200px"/> <img src="assets/leg2.png" width="200px"/>
</div> </div>
</div> </div>
<footer class="card-footer toolbar"> <footer class="card-footer toolbar">
......
...@@ -15,7 +15,7 @@ ...@@ -15,7 +15,7 @@
<div *ngIf="wrapper.type === 'virus'"> <div *ngIf="wrapper.type === 'virus'">
<p> <p>
<b><span>Virus:</span></b> <b><span>Virus:</span></b>
{{ wrapper.data.virusName }} {{ wrapper.data.virusName.replace('V', 'V-') }}
<span class="icon is-small"><i class="fas fa-virus"></i></span> <span class="icon is-small"><i class="fas fa-virus"></i></span>
</p> </p>
<p> <p>
......
...@@ -6,7 +6,7 @@ ...@@ -6,7 +6,7 @@
<b *ngIf="item.type == 'virus'"> {{item.data.effectName}}</b> <br/> <b *ngIf="item.type == 'virus'"> {{item.data.effectName}}</b> <br/>
<span><small *ngIf="item.type === 'virus'">Viral Protein</small><small *ngIf="item.type === 'host'">Host Protein</small> | </span> <span><small *ngIf="item.type === 'virus'">Viral Protein</small><small *ngIf="item.type === 'host'">Host Protein</small> | </span>
<span *ngIf="item.type == 'host'"><small>AC: <b>{{item.data.proteinAc}}</b></small> </span> <span *ngIf="item.type == 'host'"><small>AC: <b>{{item.data.proteinAc}}</b></small> </span>
<span *ngIf="item.type == 'virus'"><small><b>{{item.data.virusName}}</b></small></span> <span *ngIf="item.type == 'virus'"><small><b>{{item.data.virusName.replace('V', 'V-')}}</b></small></span>
</ng-template> </ng-template>
</ng-select> </ng-select>
</div> </div>
...@@ -3,7 +3,7 @@ ...@@ -3,7 +3,7 @@
<section class="hero is-small is-primary"> <section class="hero is-small is-primary">
<div class="hero-body"> <div class="hero-body">
<div class="container"> <div class="container">
<h1 class="title">About COVex</h1> <h1 class="title">About CoVex</h1>
</div> </div>
</div> </div>
</section> </section>
...@@ -17,13 +17,18 @@ ...@@ -17,13 +17,18 @@
<div class="content"> <div class="content">
<p> <p>
<br> <br>
COVex (Coronavirus Explorer) is a unique online network and systems medicine platform for data analysis that CoVex (Coronavirus Explorer) is a unique online network and systems medicine platform for data analysis that
integrates virus-human interactions for SARS-CoV-2 and SARS-CoV-1. It implements different network-based integrates virus-human interactions for SARS-CoV-2 and SARS-CoV-1. It implements different network-based
approaches for the identification of new drug targets and new repurposable drugs. approaches for the identification of new drug targets and new repurposable drugs.
<br> <br>
<br> <br>
For detailed information please visit our blog: <a href="https://www.exbio.de/exbio-vs-covid-part-1/"> https://www.exbio.de/exbio-vs-covid-part-1/</a> For detailed information please visit our blog: <a href="https://www.exbio.de/exbio-vs-covid-part-1/"> https://www.exbio.de/exbio-vs-covid-part-1/</a>
<br>
<br>
We are constantly updating and integrating new data as it becomes available.
<br>
If you are interested to make your virus-human interactome data available via our platform, please contact us.
</p> </p>
<h2 class="subtitle">General workflow of the platform</h2> <h2 class="subtitle">General workflow of the platform</h2>
...@@ -36,12 +41,12 @@ ...@@ -36,12 +41,12 @@
<li>Find drugs associated with the subnetwork (TrustRank, closeness centrality).</li> <li>Find drugs associated with the subnetwork (TrustRank, closeness centrality).</li>
<li>Download your results.</li> <li>Download your results.</li>
</ol> </ol>
<p>COVex also provides a quick analysis option to perform steps 3 to 5 (starting from the seed proteins) to <p>CoVex also provides a quick analysis option to perform steps 3 to 5 (starting from the seed proteins) to
return return
a list of drugs ranked by default using TrustRank.</p> a list of drugs ranked by default using TrustRank.</p>
<h2>Help/Contact information</h2> <h2>Help/Contact information</h2>
<ul> <ul>
<li>Systems and Network Medicine: Sepideh Sadegh (sadegh_AT_zw.tum.de)</li> <li>Systems and Network Medicine: Sepideh Sadegh (sadegh_AT_wzw.tum.de)</li>
<li>Web platform: Julian Matschinske (julian.matschinske_AT_wzw.tum.de)</li> <li>Web platform: Julian Matschinske (julian.matschinske_AT_wzw.tum.de)</li>
<li>Project coordination: Prof. Dr. Jan Baumbach (jan.baumbach_AT_wzw.tum.de)</li> <li>Project coordination: Prof. Dr. Jan Baumbach (jan.baumbach_AT_wzw.tum.de)</li>
<li>Lab Website: <a href="http://www.exbio.de">http://www.exbio.de</a> </li> <li>Lab Website: <a href="http://www.exbio.de">http://www.exbio.de</a> </li>
......
...@@ -154,7 +154,7 @@ ...@@ -154,7 +154,7 @@
<button class="button is-loading center" alt="loading...">Loading</button> <button class="button is-loading center" alt="loading...">Loading</button>
</div> </div>
<div class="image2"> <div class="image2">
<img src="assets/legend1.png" width="160px"/> <img src="assets/leg1.png" width="180px"/>
</div> </div>
</div> </div>
</div> </div>
......
...@@ -86,7 +86,7 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit { ...@@ -86,7 +86,7 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit {
hostTarget: 'Human brain and fetal brain cDNA libraries in yeast strains', hostTarget: 'Human brain and fetal brain cDNA libraries in yeast strains',
method: 'High-Throughput Yeast Two Hybrid Screen (HTY2H) and validations with Lumier assay, ' + method: 'High-Throughput Yeast Two Hybrid Screen (HTY2H) and validations with Lumier assay, ' +
'as well as experimentally validated interactions from 20 publications.', 'as well as experimentally validated interactions from 20 publications.',
source: null, source: ['https://www.ncbi.nlm.nih.gov/pubmed/22046132', 'NCBI'],
year: 2011, year: 2011,
datasetNames: 'Pfefferle et al., 2011', datasetNames: 'Pfefferle et al., 2011',
backendId: 'SARS_CoV1', backendId: 'SARS_CoV1',
...@@ -98,8 +98,8 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit { ...@@ -98,8 +98,8 @@ export class ExplorerPageComponent implements OnInit, AfterViewInit {
hostTarget: 'Different human cell lines', hostTarget: 'Different human cell lines',
method: 'Literature curation, interactions from 14 publications, which have experimental validation by at ' + method: 'Literature curation, interactions from 14 publications, which have experimental validation by at ' +
'least one of the following assays: co-immunoprecipitation, two hybrid, pull-down, mass spectrometry.', 'least one of the following assays: co-immunoprecipitation, two hybrid, pull-down, mass spectrometry.',
source: null, source: ['http://virhostnet.prabi.fr/', 'VirHostNet 2.0'],
year: null, year: 2014,
datasetNames: 'VirHostNet 2.0', datasetNames: 'VirHostNet 2.0',
backendId: 'SARS_CoV1', backendId: 'SARS_CoV1',
data: [['VirHostNet', 'SARS-CoV1']] data: [['VirHostNet', 'SARS-CoV1']]
......
src/assets/leg1.png

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src/assets/leg2.png

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src/assets/legend_main_network.png

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